Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00640 ATGGTGGTTGAAGAGGGTGAGATGAACTCCCAAGGCGAGGTGGAATCAAGATTCCAACAAGATGGCAACAAGAACCACCATTCTCCATTCTCACCATCATCCATTGGAAGACAAACATCGATATACTCCCTCACGCTGGACGAGTTCCAGCACAGTCTATGCGAGACGGGCAAGAACTTCGGCTCCATGAACATGGACGAGTTTCTCAGCAGCATCTGGAACGCAGAAGAGAACCAAGCCATAATAACCTCCTCCAACGTCCCTCTTTCCCAACCCTTCATAGACAAAGAAGCAACAACAACACTAGGGAAACAGCCAAGCCTACCTCGCCAACCCTCACTGTCTCTCCCTGCACCTCTCTGCAGGAAAACCGTGGACGAAGTTTGGTCCCAGATTCAGAAAGAACAACACGACAACATTAACAACAACAATGTTCTGAATAATACCGAGTCTGCCCCTCGCCAGCCCACTTTTGGTGAGATGACTTTGGAGGATTTTTTGGTCAAGGCTGGGGTGGTTAGGGAACCACCATGTGCACCACCACAGTTGTCTCATCATTCTCAACACCTCCACCAACAGCAGCAGCAGCAGCATTACACGAATAACAACAGTGCAATGCCAGGAATGGGTTCTTCTTTTGTTGGTAGGAATGTTATCGGTGCAGTGAGTAACGTGGTTGCACCGGGTTACCAAGTGGGGGAGGCTTCTGGTGGGTATGCTGGAAATGGTAAGAGGGATGGTGGTGGGGGGTTTCATCAGCAAGGGGTTTGCTTTGGAGGGAGTGGGTATGGAATGGGTCCCACGATCGGAATGGGTGGGCCTGTGAGTCCGGCTAATTCTTCTGATGGGATAGGGAATGATTGTGGGCAGTTTGGGCTTGAGATGGGTGGTTTGAGAGGTAGGAAGAGGATAGGGGATGGTCCTGTGGAAAAGGTGGTGGAGAGGAGGCAGAGAAGGATGATCAAGAATAGAGAGTCAGCTGCCAGATCTAGAGCCAGAAAACAGGCATACACGGTTGAATTAGAAGCTGAACTAAACCAATTAAAAGAAGAGAACGCCCAACTGAGACAGGCGCTGGCCGAGCTCGAGAGGAGAAGAAAGCAACAGTGTTTTGAAGAATTAAACAATATTAGAGTTCAAACAAAAGCTCAGAAAGTGAAAGAGAAACTGAGAACTTTGAGGAGGAACATGAGTTATCCT 1200 0.4883 MVVEEGEMNSQGEVESRFQQDGNKNHHSPFSPSSIGRQTSIYSLTLDEFQHSLCETGKNFGSMNMDEFLSSIWNAEENQAIITSSNVPLSQPFIDKEATTTLGKQPSLPRQPSLSLPAPLCRKTVDEVWSQIQKEQHDNINNNNVLNNTESAPRQPTFGEMTLEDFLVKAGVVREPPCAPPQLSHHSQHLHQQQQQQHYTNNNSAMPGMGSSFVGRNVIGAVSNVVAPGYQVGEASGGYAGNGKRDGGGGFHQQGVCFGGSGYGMGPTIGMGGPVSPANSSDGIGNDCGQFGLEMGGLRGRKRIGDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLRQALAELERRRKQQCFEELNNIRVQTKAQKVKEKLRTLRRNMSYP 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00640 400 SMART brlzneu 311 377 IPR004827 GO:0003700|GO:0006355
Lapu6g00640 400 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 37 372 IPR043452 GO:0003700|GO:0045893
Lapu6g00640 400 MobiDBLite consensus disorder prediction 185 208 - -
Lapu6g00640 400 MobiDBLite consensus disorder prediction 180 208 - -
Lapu6g00640 400 SUPERFAMILY Leucine zipper domain 315 364 IPR046347 GO:0003700|GO:0006355
Lapu6g00640 400 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 318 333 IPR004827 GO:0003700|GO:0006355
Lapu6g00640 400 MobiDBLite consensus disorder prediction 1 36 - -
Lapu6g00640 400 Pfam bZIP transcription factor 315 366 IPR004827 GO:0003700|GO:0006355
Lapu6g00640 400 MobiDBLite consensus disorder prediction 12 36 - -
Lapu6g00640 400 CDD bZIP_plant_BZIP46 315 369 - -
Lapu6g00640 400 Coils Coil 331 372 - -
Lapu6g00640 400 Gene3D - 313 364 - -
Lapu6g00640 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 313 365 IPR004827 GO:0003700|GO:0006355
Lapu6g00640 400 Coils Coil 376 396 - -
Lapu6g00640 400 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 313 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00640 Lapu-Chr6 6724719 6727428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00640 1 370 bZIP Transcription Factor Family AT2G36270 50.000 2.88e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu6g00640 bZIP_1 8.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00640 K14432 - gmx:100818567 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00640 6 6724719 6727428 Lapu6g00640 6 6724719 6727428 ECH
Lapu6g00640 6 6724719 6727428 Lapu7g01184 7 24770453 24772541 PCT