Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00629 ATGGAGGTGGAACAGGATGCCAATTTATTACATAACTCAAGTAACCTTTCAGGTCGATGCAACAAGTCAAGAAGAAATTTAACTGAGGAAGAAAAAGAAGAAAGGAGGGTACGCAGAATATTAGCAAATAGAGAGTCAGCTAGGCAGACAATTCGCCGCAGACAGGCTCTGTGTGAGGAGTTAACAAAAAAAGCTGCCACTTTGATAGTGGAGAATGAAAGTCTAAAGAAGGAGAAAGATGTGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGTACTTAAAGGCACAGATAGCCAAGTCAATAAACAATGAAGTGGAGAAAACTCCTGTTGAGCCCAAGTCATCTGCGGCTGAGGTAACTGTGGCTGAGGTAACACCTTCGTCTGGTAATGGTCCATGGTTCCTTTATAACCATTTTCCAGTTCAACATGTATTTTGGCCTTCTCCCCTTCAGCCTTCTTATCCAGTTCACTTACCAAATACATCATTTAATTCCATCATCATTCCATCTATTGCTAATGTTCCATGTTCTTCCGAGTCTGAATCATGTCAGAAGCAAAACAACCTTATAAATGATAAACAAACACAAAATCCATTTTATATGTTTCCATGTCCTTGGATATTCCCTTTTCCACAGTTTGGAAATGGACAATCATCACCTTCCAGTAACCTGAATGATAAACAAAATAATCTTTCTCTAGGCAAAGCTTGTAGTTCTAGTTCATCTTTGAATACACTGGCAAATGTGGATTATCAAGCCTGGACAGAGGCCAGACGCATTAATGACCCTCCAAGATTTTCTTTGGATGGAGGTGAGAAGAAAACAGGATGTCAGATTATCGAAAAGTATCATGGAGCCACACTTGGTTGTAATTGTCATGCTTCTGCTATCGAACAAGAAAACGAACTTCAATTACATCCTGCTGCAAATAATAAAGCATCTTCAACAGCTTATATTGCAACAACTTCACTGGAAAAGAAACAAGAACAGTTCATTTGCCAGGGGAAAAGTCTAGCAGATGCAGTTGCTGCGGCAGAAGCAAGAAAGAGGAGAAAAGAATTAACAAAGCAGAAAAGCATCCATAACCGCCAGCCCCGAATGCAGTGTTAA 1119 0.3977 MEVEQDANLLHNSSNLSGRCNKSRRNLTEEEKEERRVRRILANRESARQTIRRRQALCEELTKKAATLIVENESLKKEKDVALKEYQSLETTNKYLKAQIAKSINNEVEKTPVEPKSSAAEVTVAEVTPSSGNGPWFLYNHFPVQHVFWPSPLQPSYPVHLPNTSFNSIIIPSIANVPCSSESESCQKQNNLINDKQTQNPFYMFPCPWIFPFPQFGNGQSSPSSNLNDKQNNLSLGKACSSSSSLNTLANVDYQAWTEARRINDPPRFSLDGGEKKTGCQIIEKYHGATLGCNCHASAIEQENELQLHPAANNKASSTAYIATTSLEKKQEQFICQGKSLADAVAAAEARKRRKELTKQKSIHNRQPRMQC* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00629 372 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 96 IPR004827 GO:0003700|GO:0006355
Lapu6g00629 372 Pfam bZIP transcription factor 31 93 IPR004827 GO:0003700|GO:0006355
Lapu6g00629 372 Coils Coil 44 92 - -
Lapu6g00629 372 Gene3D - 33 87 - -
Lapu6g00629 372 Coils Coil 347 367 - -
Lapu6g00629 372 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Lapu6g00629 372 MobiDBLite consensus disorder prediction 7 22 - -
Lapu6g00629 372 MobiDBLite consensus disorder prediction 1 34 - -
Lapu6g00629 372 PANTHER G-BOX-BINDING FACTOR 3-RELATED 18 187 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lapu6g00629 372 SUPERFAMILY Leucine zipper domain 35 88 IPR046347 GO:0003700|GO:0006355
Lapu6g00629 372 CDD bZIP_plant_GBF1 40 87 IPR045314 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00629 17 372 bZIP Transcription Factor Family AT1G19490 36.290 1.96e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu6g00629 bZIP_1 2.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00629 - - vra:106757437 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00629 6 6608604 6611417 Lapu6g00629 6 6608604 6611417 ECH