Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00627 ATGAAGGTCATCGCCGCCTACTTGCTCGCCGTCTTGGGAGGCAACTCTGCGCCTTCCGCTGATGACTTAAAGGTCATCCTTGGATCTGTTGGAGCAGACGCGAATGATGACAATATCAGTAACTTCTTGTCCGAAGTCAAGGGCAAAGACATCGCCGAGCTTATCGCTGCCGGTAGAGAAAAGTTGGCCTCAGTGCCTTCCGGTGGTGGTGCCGCCGTTGCCGTGACCGCCTCTTCCGGAGGTGGCGCTTCTGCTCCGGCAGCCGCCGAATCAAAGAAGGAGGAAAAGGTGGAAGAGAAGGAGGAATCAGATGACTTTGAGAAGTATCTGATTGTTTTTGTTGTTGGTTTGTTTGGCGATGCAGGATATGGGCTTCAGTCTCTTTGA 387 0.5271 MKVIAAYLLAVLGGNSAPSADDLKVILGSVGADANDDNISNFLSEVKGKDIAELIAAGREKLASVPSGGGAAVAVTASSGGGASAPAAAESKKEEKVEEKEESDDFEKYLIVFVVGLFGDAGYGLQSL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00627 128 FunFam 60S acidic ribosomal protein P2 1 59 - -
Lapu6g00627 128 Hamap 50S ribosomal protein L12 [rpl12]. 2 119 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lapu6g00627 128 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 105 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lapu6g00627 128 MobiDBLite consensus disorder prediction 77 103 - -
Lapu6g00627 128 Pfam 60s Acidic ribosomal protein 18 105 - -
Lapu6g00627 128 MobiDBLite consensus disorder prediction 89 103 - -
Lapu6g00627 128 CDD Ribosomal_P2 1 72 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lapu6g00627 128 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00627 Lapu-Chr6 6591075 6591686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00627 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 71.429 2.24e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00627 K02943 - gmx:100787024 120.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00627 6 6591075 6591686 Lapu6g00627 6 6591075 6591686 ECH