Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00626 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAAGGGAGGAGCTAAATACAAGGAAAGCTCCTGGGATTTACCAGTACAATTCTGAGTGTAGCACGTCTGAGAAAAGTCACAAACTTTCGGTGCTGAAATTGGGATACAAGGATGATCTAGATGATGATATTAATAAGCTGTTTGAATCAATTGCTCTTAAGTCTTCATCAAGGGATTTGGGTCTTTTACAAGACGGTACAAGTCCTAGGCTGAAAAGTGCTTTAAAAAAGCCAATTACAATGGGTGTTCCTCGGTCCCCGAGAGTTGGGGCTTCTGAGCCTGTTAATTTGAAGCAAGCATTAAGAGACCTTTGCATATCTAAGGCATCGGAAATGGCCGCTATGAAGCGATTATCGAAGTCAACAGCTTCTCCAAGAATATCTGAAGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAAACCAGTCGATCTGGGCCTTCATCTGTTGAATGCAAGGAGCGTCAAATTGAAGCAGCTCTTGTGCCAGAAAAAAGTAAGTCCTTTTCATTGGTGAAAACCTCTCAATCTTATCAAACTGCCCAAATCGCATCATCGAGCCGAAACATTCATTCGTCTCGGGAAATTGCTGTTGCTACTACTCAATGTGATTCTGGGACTTCATCGATACAAAGTGATTTGGCATGCCCATCAAGTAAAGTTGGAATTCAATCACAACGAGTGGTACCTGTTGAAACAGAAGAACAAGCATCTGCCTCTTCATCTTCTCTTCATAATACAATTGGAAGCAAACTAGAGGTGCCCAAAAATGCTTCTTCCCCTAAAAAGTTGGGTAATAAAGCATTTGTGTCGAATAACGGGAAGAAAGGTAGGTTGCAAACGGTATCTTCATCTACTTCTATAAATGGCAACAGAGTTAACAAACTGCCACGCCATGCCCCCCGCATTGTTAAATCGGTCGTCAAGAACAAGAATCTGACTAAGAAGAAACTAAAGGAGGATTCAGACTCTGCTTTATGTGGTCCTATGCCCAATGGAGTTAAGAAGCCAGTTTCTGGTACGCCTCGGCTAATTTGTGAGAGATGTAGATGTGCTTTAGAAAATACAAGTGAAGAAAAAAGCCAAGATACTGTGGCATTGGACTCTACCAGTTCTGGAAATGGAGTAAACTTGAGTGATGTGCACTCTGGTTCAAATAAACCTGGTTTGGTGTCAACTGGCGGTAATAAAAGCAAAACACTTGCTAAAGTGAAGAACTCCAAGTTGAAAGAGCAACTTGAATTTTCACAAAGTTCTAAAAGTAGTCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAACGTAAGTGGCTCAAGTCGTAGCACTAGGCCTCACATGTCAAAAGATGTCAGATGGGAAGCCATTAGACATGCTCAAATGCAGCACGGAGTCTTGAGCTTGAGACACTTCAATCTCTTAAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCGGAACTAATTGGCACAAGCTGCCTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGAAAGGAGAAAGAAAATGCCTAGAGCTCAAACTGAAAGGGAAATACTAAGGATTCTAGATCATCCTTTTCTTCCCACAATGTATGCACAATTTACATCAGATAATCTATCGTGTCTCATCATGGAGTATTGTCCGGGAGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATGTTTCTCAGAGCCAGCTGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCGTTGGAGTACTTGCACATGCTTGGAGTGGTTTACCGTGATTTGAAACCGGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTTAACCCAACACTTCTGAAATCATCTTCTGATGTCGACCCTGCAAAGGTTTCTGGTCTTAGTGTGCAATCAAGTTGCATTGAACCATTCTGCATCGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTCCTACCTGCGGCTGCGAAAACAAGGAAATTAAAAGCTGATCCTTCTGCCCAGGTCAGATCATTGCCACAGCTGGTGGCTGAGCCCACTGATGCAAGATCAAACTCATTTGTTGGTACACATGAATACTTGGCTCCCGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGAGTTTTTCTCTATGAACTGTTGTATGGTAGAACACCCTTTAAAGGTTCTAACAATGAAGAAACATTGGCCAACGTTGTGATGCAAAGTCTTAGATTCCCTGACCACCCATTCGTTAGTTTCGAAGCAAAGGATCTGATTAGAGGGTTGTTGGTTAAGGAGCCTGTTAACCGTTTGGGTTCAGAGAAAGGGGCTGCTGAGATTAAACAGCATCCCTTCTTTGAGGGCCTTAACTGGGCCTTAATTCGTTGCGCTGTCCCTCCAGAACTTCCAGACTATTATGATTTGGGAGTTTCAGACATGATTAACTCACATGTTAAGGGTGCTAAGTACTTAGAGTGTAAAGTAGGAGAGCGTGTAGAATTCGAGTTGTTTTAA 2613 0.4252 MGSFSGTCEIVEAREELNTRKAPGIYQYNSECSTSEKSHKLSVLKLGYKDDLDDDINKLFESIALKSSSRDLGLLQDGTSPRLKSALKKPITMGVPRSPRVGASEPVNLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVAETSRSGPSSVECKERQIEAALVPEKSKSFSLVKTSQSYQTAQIASSSRNIHSSREIAVATTQCDSGTSSIQSDLACPSSKVGIQSQRVVPVETEEQASASSSSLHNTIGSKLEVPKNASSPKKLGNKAFVSNNGKKGRLQTVSSSTSINGNRVNKLPRHAPRIVKSVVKNKNLTKKKLKEDSDSALCGPMPNGVKKPVSGTPRLICERCRCALENTSEEKSQDTVALDSTSSGNGVNLSDVHSGSNKPGLVSTGGNKSKTLAKVKNSKLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWEAIRHAQMQHGVLSLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLIMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPTLLKSSSDVDPAKVSGLSVQSSCIEPFCIEPSCQVPCFSPRFLPAAAKTRKLKADPSAQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVMQSLRFPDHPFVSFEAKDLIRGLLVKEPVNRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPDYYDLGVSDMINSHVKGAKYLECKVGERVEFELF* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00626 870 SMART serkin_6 487 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00626 870 FunFam serine/threonine-protein kinase D6PK-like 714 837 - -
Lapu6g00626 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Lapu6g00626 870 PANTHER FLIPPASE KINASE 1-RELATED 230 839 - -
Lapu6g00626 870 FunFam serine/threonine-protein kinase D6PK-like 571 638 - -
Lapu6g00626 870 MobiDBLite consensus disorder prediction 371 464 - -
Lapu6g00626 870 Pfam Protein kinase domain 488 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00626 870 Pfam Protein kinase domain 716 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00626 870 SUPERFAMILY Protein kinase-like (PK-like) 460 843 IPR011009 -
Lapu6g00626 870 CDD STKc_phototropin_like 485 837 - -
Lapu6g00626 870 MobiDBLite consensus disorder prediction 246 308 - -
Lapu6g00626 870 FunFam Serine/threonine-protein kinase D6PK-like 485 570 - -
Lapu6g00626 870 Gene3D Transferase(Phosphotransferase) domain 1 567 635 - -
Lapu6g00626 870 MobiDBLite consensus disorder prediction 372 416 - -
Lapu6g00626 870 Gene3D Transferase(Phosphotransferase) domain 1 712 833 - -
Lapu6g00626 870 Gene3D Phosphorylase Kinase; domain 1 485 566 - -
Lapu6g00626 870 MobiDBLite consensus disorder prediction 425 460 - -
Lapu6g00626 870 MobiDBLite consensus disorder prediction 287 307 - -
Lapu6g00626 870 MobiDBLite consensus disorder prediction 246 268 - -
Lapu6g00626 870 ProSiteProfiles Protein kinase domain profile. 487 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00626 Lapu-Chr6 6576066 6581385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00626 1 870 AGC Kinase Gene Family AT2G36350 50.000 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu6g00626 Pkinase 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00626 - K08286 gmx:100792120 1447.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01137 7 23251576 23258170 Lapu6g00626 6 6576066 6581385 ECH
Lapu6g00626 6 6576066 6581385 Lapu6g00626 6 6576066 6581385 ECH
Lapu6g00626 6 6576066 6581385 Lapu7g01137 7 23251576 23258170 PCT