Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00618 ATGGCTCAGAAGTACTTGTTGCACGAGCTACTCGAGGAGGATCAAGAGCCCTTTCTTCTAAACAACTACATTTCCGATAGGAGAAGCCAGATGAAACGCCCTTCCCCCAACAACACTTTGCAAGTGAAGAAACGCAAATCAGCCAATCCAAACGCAAGCTTCCCGGGGAATTTCTGCAAAAGTGCTTGTCTTTTTTCCCTCACAGACACCCCAGATTTCAGAAAATCTCCACTCTTCGAATTCACTTCCGCGGCCAAAAGCCCTTGCAAATCCCCCAACGCTATTTTCCTTCACATCCCCTCCCGAACCGCGTCTCTGCTCCTAGAAGCTGCTGTCAGAATCCAGAAGCACTCCTCATCCGCTTCACGGCCCAAAACTAAAGCCCAATCCTTCGGCCTCCTCGGCTCCCTCTACAAGAGGCTCACACAACGGAGCCAGAAAAAGCGCGAGATAGAGGGTGGTGGAAGCGTCAAGGTCTCGGTGAAGGATATTCTGAAGTGGGATTCCTCTGTTGGCCGAAAAAAAGGTTCCAACAAGAAAGAGGATGAAGAAACTGTGAATGTGAATGCGTGTGAAGTGGGGTTTGCCTGTTCTTACAATGGTAGACCTAGTAGTGCTGTTTGGTCAGAGTCCAACGAGGATAAATCCCTCGACATGGAAACCTCAAGTAGCGGCTACTCCGAAGAGATTCACTTCATAACCAATCACAAACACTCCACCTGTTTCTGCGAAAGCCCGTTCCGTTTTGTTCTTCAGACGAGTTCTCCCTCCTCCGGCCACCACACGCCGGAGCTTCCCTCGCCGAGTCGCCACGCAACTGAGGAGAAAGAAAGTAAAGAAGGTGGGAGTAAATTCGAATCAGGGGAAGAAGAGGAGGAAGATAAGGAACAGTGCAGTCCAGTGTGTGTGTTAGACCCACCGTTCGAGGACGATGACGAAGGGCATGGCAACGGTGATGAAGGAGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAGAGCCAAGCAGCAGTTATTGTACAAGCTTCGCAGATTTGAGAAACTGGCAGAGTTGGATCCGGTAGAACTTGAGAGAAGAATGCATGATCAAGAAGAGGACGAGGATGAAACATTTATGGAAGAGGAAGGTCGTGAAAATGAGGATAAAGAAACGTCGCGTAAAGAAAATGACTTTAGAGAACTAATTTTGCAAGCTCTGTGCCAGTCAAGGGTCTATGACAGACAGCAAATGCCAGAGGACTTTAAGAAGCTGGTATCTGATCTCATAATGGAAGAAGATAGAGAACTTGATTACTTGGAAGATAGGGATATGGTGATAAGAAGGATATGCAAGAGGTTGGAATTGTGGAAAGAAGTGGAGTCCAACACAATTGATATGATGATAGAAGATGACTTCTCTAGGGAGGATGGTGGGTGGAAGAAAAATGTGGAGCAGATAAGAAATATGGCTGGGGAGCTTGAGTGTGCTATCTTTGGCTTTCTGGTGGAGGAATTTTCAGAAGAACTAGTATGTTAA 1527 0.4722 MAQKYLLHELLEEDQEPFLLNNYISDRRSQMKRPSPNNTLQVKKRKSANPNASFPGNFCKSACLFSLTDTPDFRKSPLFEFTSAAKSPCKSPNAIFLHIPSRTASLLLEAAVRIQKHSSSASRPKTKAQSFGLLGSLYKRLTQRSQKKREIEGGGSVKVSVKDILKWDSSVGRKKGSNKKEDEETVNVNACEVGFACSYNGRPSSAVWSESNEDKSLDMETSSSGYSEEIHFITNHKHSTCFCESPFRFVLQTSSPSSGHHTPELPSPSRHATEEKESKEGGSKFESGEEEEEDKEQCSPVCVLDPPFEDDDEGHGNGDEGEEGGFDLECSYAIVQRAKQQLLYKLRRFEKLAELDPVELERRMHDQEEDEDETFMEEEGRENEDKETSRKENDFRELILQALCQSRVYDRQQMPEDFKKLVSDLIMEEDRELDYLEDRDMVIRRICKRLELWKEVESNTIDMMIEDDFSREDGGWKKNVEQIRNMAGELECAIFGFLVEEFSEELVC* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00618 508 MobiDBLite consensus disorder prediction 267 288 - -
Lapu6g00618 508 PANTHER OS04G0572500 PROTEIN 1 506 - -
Lapu6g00618 508 MobiDBLite consensus disorder prediction 362 391 - -
Lapu6g00618 508 MobiDBLite consensus disorder prediction 29 49 - -
Lapu6g00618 508 MobiDBLite consensus disorder prediction 254 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00618 Lapu-Chr6 6428414 6431597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00618 1 309 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 45.833 2.18e-62 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00618 - - gmx:100790018 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00618 6 6428414 6431597 Lapu6g00618 6 6428414 6431597 ECH
Lapu6g00618 6 6428414 6431597 Lapu7g01134 7 23120155 23123919 PCT