Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00614 ATGGAAATGGAGGACCATCATCATCATCATCAACATCATGAGCACCACCACCACCACCAACAGTATGCCATCACTGATCTGAGGCAACTCATGAACGGCCCCAGGTCCAGCCATTTCCCCTCCATGCCGCCGCAGCCCAAGGCGGAACTGTTCCCCGGCGGCCACCCCAACCTGGCGCCCACGCAGCACTTCGAGATGATGATGTTTGGTCGTCAAGTGGCAGACATAATGCCTCGGTGTCTTCATGACTTTGCCTCTACCGATTCCGCCGCGAATAATAACAATACCAGCATCGCTGCTGCCACTCCCACGACAACCACTAGTGCCTCCACTCCTCCGCTTAGTTGCTTAGAGGGTGAGACCGCAGGATGCATCGGTGGAGACACCTCCACTGGAAGATGGCCCAGACAAGAGACTCTCACTCTTCTTGAGATCAGATCTCGCCTCGACTCTAAATTCAAAGAGGCTAATCAAAAGGGTCCCCTATGGGATGAAGTTTCTAGGATCATGTCTGAAGAACATGGATATCAAAGGAGCGGGAAGAAGTGCCGAGAGAAGTTTGAGAACCTGTACAAATATTACAAGAAGACAAAGGAGGGAAAAGCAGGAAGACAGGATGGGAAGCATTACAGGTTCTTTCGTCAACTTGAAGCCTTATATGGTGAAAACAGTAACCAAACTTCGGTGCCAGAAACCAATTTTGGTAGTAGCAGCCTTCGATTCCACGCAAACAGCCACAACCCTTCTCAAACAAATCAAGAAATGTTTCAGTCTCAGAAGCATTGTGATAGCCTAAGTCTCACCAACTCCACTGATTTGGACACGTCATCATCGGATGACAATGATCGGAATAGTACTGGGGGCCTCAAGGACAATGACTCCACAGAGAAGAGGAGAAAGAGGTTGAGTGGAAGAAGCTGGAAGGTGAAGATAAAAGACTTCATTGACTCACAGATGAGGAAGCTGGTGGAGAAGCAAGAGGAGTGGTTGGATAAACTCACAAAGACACTGGAACAGAAAGAAAAGGAGAGGGTGTCAAGAGAAGAAGAGTGGAGGAGACAAGAAGCTGTAAGGTTGGAGAGAGAACACAAATTTTGGGCTAAAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCTTTAATGGAGGCTTTGCAAAAACTAACAGGAAATGAGATGATAAAGAGTACTCAATCTCCTGAGGGTCTAATGGTAACTGGAATTCAAAACCACAATGAAAACCTGAATGAAGATGGGAGTGAAATACTGAATAGTACTACTGCCAGAGGTGCTGAAAGCTGGCCAGAATCTGAGATTACTAGGCTTCAACAGTTGAGAGCTGAGATGGAGACGAGGTATATGCAAAGTGGGTGTTCAGAAGAGATTATGTGGGAGGAAATAGCAACCAAAATGACTTGTCTTGGTTACGAAAGGAGTGCTTTGGTGTTCAAAGAGAAATGGGAGAGTGTCAGCAACTACGCAAGGAATGCTAAGGATGGAAACAAGAAGCGCAAGGAAGACTCTAGAGGTTGTTTCTACTTCGATAACAGTGAACAGTCTTCTCTGTATAACCAAGGTGGGGCCTATTGTGATATTAATGATCAAAGGCACGACACTGGGAGGCTGCAAAATGATGGTTCTTCACCTTCAAATTCAAATGTTGGAAATGCAGTTGCAGGAGACAACTGCTTTCCCTTCTTGATGACTGAAGGTGCAAATTTGTGGGAGAACTATAGCTTAAAGGTTAATAAAGCAAGCCAAAACCAGTGA 1767 0.4629 MEMEDHHHHHQHHEHHHHHQQYAITDLRQLMNGPRSSHFPSMPPQPKAELFPGGHPNLAPTQHFEMMMFGRQVADIMPRCLHDFASTDSAANNNNTSIAAATPTTTTSASTPPLSCLEGETAGCIGGDTSTGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNQTSVPETNFGSSSLRFHANSHNPSQTNQEMFQSQKHCDSLSLTNSTDLDTSSSDDNDRNSTGGLKDNDSTEKRRKRLSGRSWKVKIKDFIDSQMRKLVEKQEEWLDKLTKTLEQKEKERVSREEEWRRQEAVRLEREHKFWAKERAWIEARDAALMEALQKLTGNEMIKSTQSPEGLMVTGIQNHNENLNEDGSEILNSTTARGAESWPESEITRLQQLRAEMETRYMQSGCSEEIMWEEIATKMTCLGYERSALVFKEKWESVSNYARNAKDGNKKRKEDSRGCFYFDNSEQSSLYNQGGAYCDINDQRHDTGRLQNDGSSPSNSNVGNAVAGDNCFPFLMTEGANLWENYSLKVNKASQNQ* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00614 588 CDD GT1 433 497 - -
Lapu6g00614 588 MobiDBLite consensus disorder prediction 223 302 - -
Lapu6g00614 588 FunFam Trihelix transcription factor GT-2 433 495 - -
Lapu6g00614 588 MobiDBLite consensus disorder prediction 533 553 - -
Lapu6g00614 588 PANTHER FI21293P1 87 547 - -
Lapu6g00614 588 CDD GT1 133 198 - -
Lapu6g00614 588 Gene3D - 433 495 - -
Lapu6g00614 588 Gene3D - 134 196 - -
Lapu6g00614 588 MobiDBLite consensus disorder prediction 223 275 - -
Lapu6g00614 588 Pfam Myb/SANT-like DNA-binding domain 133 219 IPR044822 -
Lapu6g00614 588 Pfam Myb/SANT-like DNA-binding domain 432 515 IPR044822 -
Lapu6g00614 588 Coils Coil 323 350 - -
Lapu6g00614 588 ProSiteProfiles Myb-like domain profile. 126 191 IPR001005 -
Lapu6g00614 588 SMART sant 130 193 IPR001005 -
Lapu6g00614 588 SMART sant 429 492 IPR001005 -
Lapu6g00614 588 MobiDBLite consensus disorder prediction 276 300 - -
Lapu6g00614 588 MobiDBLite consensus disorder prediction 1 57 - -
Lapu6g00614 588 FunFam trihelix transcription factor PTL-like 134 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00614 Lapu-Chr6 6383819 6387199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00614 19 583 Trihelix Transcription Factor Family AT5G03680 46.798 3.69e-147 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu6g00614 Myb_DNA-bind_4 3.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00614 - - gmx:100813245 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00614 6 6383819 6387199 Lapu6g00614 6 6383819 6387199 ECH