Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00608 ATGCCCGCCAGAAGATCCAGCAACTACTCCCTCCTAAACCAAACGACCGACGACAACTTAACGGTTCCGTTCTTCGACTCTTCCTCCGGCGACGGTAAAAACAACAGGAGCAAGTTGGAGAGAGTCTCCGATTGGGACTCCATCGTTGATCACAGGCAGGGGAACCGGATCGGGAATTTGTACTCCTCGTTCGGGATGCAGCGGCAGTCAAGTGGGAGCAGTTTCGGTGAGAGCTCGCTCTCAGGAGAGTTTTACGCGCCTACTCTGTCCACCGTAGCCCCCGATGAGACTGACGAATTCAAATTTGGCGAGGTCAGAGGCAGGTTTCCGGACGCCGTGGCGGCGAGGAGCGGCGGGTCCTACGGCAAGAGCTGGGCGCAGCAGACAGAGGAGGGTTATCAGTTACAGCTGGCATTGGCTCTTCGACTTTCGTCAGAGGCCACGTGTGCTGATGATCCCAATTTTCTGGATCCCGTGCCCGATGAATACTCTTCGAGGTCATCGTGTTCCGTGGAGACTGTGTCTCATAGGTTTTGGGTGAATGGATGCCTATTATACTTTGACAAAATTCCTGATGGCTTTTATCTAATTCATGGAATGGATCCCTATATATGGACTGTGTGCACTGATCTTCTGGAAAATAGCCGAATTCCTTCAATAGAGACACTAAAATCTGTAGATCCTTCTTCCGATTCTTCACTTGAAGTAATTTTGGTGGATAGACATAGTGATCCTACCTTAAAAGATTTGCAAAACAAGGTACATGACATTTTTTGTCACTGCATAACAACAACAGATGTTGTAGACCAGCTTGCAAAGCTGGTATTCGATTGTATGGGGGGTTCAGCTTCTGTATGGGAAGCCGATCTTTTTCCCATATGGAGGGAGTGCATTAATGATCTAAGAGATCGCATAGGATCTGTTGTTGTGCCGATTGGCAGCCTATCTATTGGTCTTTGCAGGCATCGTGCTGTATTATTCAAAATGCTAGCTGACACCATTGATTTACCGTGTCGAATTGCAAAAGGTTGTAAATATTGTTCAAGAGAAGATGCTTCATCATGTCTTGTTCGATTTGGGCTTGACAGAGAATACATGGTTGATCTAATTGGGAACCCGGGTTGCTTATGTGAGCCTGATTCCTTGCTGAATGGTCCATCCTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACTCAAACCAGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAATATTTCTCGGATCGTATGCCCACTGAGCTTGTCTTCGATAGTGGTATTGCAGAACAGTATGAAAGGCAGTACCGGGACAGGAACCCTGGGCCAATTCCAAATGATAACAACAGAAGTTCTCTTGTTCCTCCACTACCACAGACTTATCGTCCAAGTGCACATGATCGAGACTCTGAAACATTTCAATCAGGTAACCCTCGACAGAATGTTGTGGAGCCGACATTGGCGAGCAAGGATTCGTTGCCTTTAAATAATAGCCGTCCTGGTCATAGATATACACAGACCCGATTACTGATTTCTAGCGAACCATCCAGAGTGTTTTCCCTAGATATGGAGGATCTGGACATACCATGGACTGATCTTGTTTTAAAAGGGAGAATAGGATCAGGTTCTTTTGGAACCGTACATCAAGCTGAGTGGAATGGCTCGGAGGTTGCTGTGAAAATTCTGATGGAACAAGACTTCGCAGGTGAACGCTTCCAGGAATTCTTGAGGGAGGTTGCAATAATGAAAGGCTTACGGCATCCTAACATTGTTTTACTTATGGGTGCAGTCACTAAGCCTCCCAATCTATCAATTGTCACAGAATACTTGTCAAGGGGTAGCTTGTATAGGCTGTTGCATAAACCTGGTGCCACAGAAATGTTGGATGAGAGACGTAGGATTAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGTAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAATCTTCTTGTTGACAAGAAATATACAGTGAAGGTTAGTGATTTTGGGCTTTCCCGACTTAAGGCAAACACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCCGAGTGGATGGCTCCAGAAGTTCTTCGTGACGAGCCATCCAATGAGAAGTCGGATGTTTACAGCTTTGGTGTCATCTTGTGGGAACTCGCAACATTGCAACAACCTTGGAGTAATTTGAATCCACCACAGGTCGTGGCAGCTGTTGGCTTTAAGGGAAAAAGACTTGAAATACCACGAGATTTAAATCCTCAATTAGCATCAATAATTGAGGCTTGCTGGGCCAATGAACCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCTTTGAAAGGATTGCTCAAACCCCCTATACCTCAACCTGGTCGTCCAAAGATGTCATTACTTAGTTGA 2433 0.4562 MPARRSSNYSLLNQTTDDNLTVPFFDSSSGDGKNNRSKLERVSDWDSIVDHRQGNRIGNLYSSFGMQRQSSGSSFGESSLSGEFYAPTLSTVAPDETDEFKFGEVRGRFPDAVAARSGGSYGKSWAQQTEEGYQLQLALALRLSSEATCADDPNFLDPVPDEYSSRSSCSVETVSHRFWVNGCLLYFDKIPDGFYLIHGMDPYIWTVCTDLLENSRIPSIETLKSVDPSSDSSLEVILVDRHSDPTLKDLQNKVHDIFCHCITTTDVVDQLAKLVFDCMGGSASVWEADLFPIWRECINDLRDRIGSVVVPIGSLSIGLCRHRAVLFKMLADTIDLPCRIAKGCKYCSREDASSCLVRFGLDREYMVDLIGNPGCLCEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDRMPTELVFDSGIAEQYERQYRDRNPGPIPNDNNRSSLVPPLPQTYRPSAHDRDSETFQSGNPRQNVVEPTLASKDSLPLNNSRPGHRYTQTRLLISSEPSRVFSLDMEDLDIPWTDLVLKGRIGSGSFGTVHQAEWNGSEVAVKILMEQDFAGERFQEFLREVAIMKGLRHPNIVLLMGAVTKPPNLSIVTEYLSRGSLYRLLHKPGATEMLDERRRISMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVSDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPPQVVAAVGFKGKRLEIPRDLNPQLASIIEACWANEPWKRPSFSSIMDSLKGLLKPPIPQPGRPKMSLLS* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00608 810 Pfam Protein tyrosine and serine/threonine kinase 537 790 IPR001245 GO:0004672|GO:0006468
Lapu6g00608 810 Pfam Ethylene-responsive protein kinase Le-CTR1 171 377 - -
Lapu6g00608 810 SMART serkin_6 536 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00608 810 CDD STKc_MAP3K-like 542 790 - -
Lapu6g00608 810 SUPERFAMILY Protein kinase-like (PK-like) 502 789 IPR011009 -
Lapu6g00608 810 ProSiteProfiles Protein kinase domain profile. 536 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00608 810 MobiDBLite consensus disorder prediction 440 504 - -
Lapu6g00608 810 Gene3D Transferase(Phosphotransferase) domain 1 615 798 - -
Lapu6g00608 810 FunFam Serine/threonine-protein kinase CTR1 615 800 - -
Lapu6g00608 810 MobiDBLite consensus disorder prediction 445 461 - -
Lapu6g00608 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Lapu6g00608 810 FunFam Serine/threonine-protein kinase isoform 1 526 614 - -
Lapu6g00608 810 MobiDBLite consensus disorder prediction 477 504 - -
Lapu6g00608 810 PRINTS Tyrosine kinase catalytic domain signature 698 708 IPR001245 GO:0004672|GO:0006468
Lapu6g00608 810 PRINTS Tyrosine kinase catalytic domain signature 651 669 IPR001245 GO:0004672|GO:0006468
Lapu6g00608 810 PRINTS Tyrosine kinase catalytic domain signature 610 623 IPR001245 GO:0004672|GO:0006468
Lapu6g00608 810 PRINTS Tyrosine kinase catalytic domain signature 717 739 IPR001245 GO:0004672|GO:0006468
Lapu6g00608 810 PRINTS Tyrosine kinase catalytic domain signature 761 783 IPR001245 GO:0004672|GO:0006468
Lapu6g00608 810 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 168 793 - -
Lapu6g00608 810 Gene3D Phosphorylase Kinase; domain 1 529 614 - -
Lapu6g00608 810 ProSitePatterns Protein kinases ATP-binding region signature. 542 563 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00608 Lapu-Chr6 6319417 6335645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00608 1 803 MAP Kinase Kinase Kinase AT5G03730 64.692 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lapu6g00608 PK_Tyr_Ser-Thr 9.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00608 K14510 - gmx:100787894 1384.01