Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00591 ATGAAAGACCCTTCTTCCATAAACCTGTCACTGCCATTGGCATTGGCATTGCCCTTTGCCTTGACCATCCTCTGTGTTGCAGAGAGTGCATGGCAAAATGATACACTCGCCCTCACCCAATTCCGCCTCCAAACCGACACCCACGGCAACCTCCTATCCAACTGGACCGGCGACGACGCCTGCTCCGCCGTGTGGCTCGGCGTGGAGTGCTCCCCAAACGGCAGAGTGGTGGGCCTCTCTCTCCCTTCCCTCAACCTCCGTGGCCCAATTGATTCTCTCTCCTCACTTGTCTACCTCCGCTTCCTCGACCTCCACGAAAACCGCTTAAACGGTACTGTTTCCCCTCTCTTAAACTGCACCGCCCTCGAACTCCTCTATCTCTCCCATAATGACTTCTCCGGCGAGATTCCGCCGCAGATATCCTCCCTCCGACTCCTTCTCCGCCTTGACATCTCCGACAACAACATCCGCGGTCCAATCCCCGACCAACTCGCCAAACTAACCCACCTCCTCACTCTTCGGTTACAGAACAATGCCCTCTCTGGCCACGTCCCCGACCTCTCCGCTTCCCTCCTCAACCTCACTCAACTCAACATCACCAACAACGAACTTCGCGGCCACGTCCCCGACTCCATGCTGGTCAAATTCGGCAATGCCAGCTTCTCCGGAAACCACGCTCTATGTGGGTCCACCCCGTTACCCAAATGTTCCGAAACCGAACCAGACACGGAGACCACAATAACCGTTCCTTCAAAACCGAGTTCGTTCCCTCAAACAAGCAGTGTGACGCTCTCTGACACTCCGAAGAAGAAAGGGCTGAGCGCGGGTGTCATAGTGGCGATTGTGGTGGCGGTTTGCGTGGCGGTGCTGGTGGCGATGTCATTCGTGGTGGCGCACTGCTGCGCGAGGGGAGGAGGAGGCTATGGATCGGCGGTGGGGAGCGAGAGTGGGAAGAGGAAGAGTGGGAGTAGTTCTGGGAGCGAGAAGAAGGTGTATGGAAATGGTGGGAATTTCGATAGAGAAAGCGATGGGACGAACACTGAGACGGAACGAAGCAAGCTGGTGTTTTTCGACAGGAGGAACCAGTTTGAGTTGGAGGATCTACTTCGAGCATCGGCGGAGATGCTGGGAAAAGGGTGCTTGGGAACGGTTTACAGAGCGGTGCTCGACGATGGCTGCACCGTCGCAGTAAAGAGACTCAAAGACGCAAACCCCTGCGAGAGAAACGAGTTTGAGCAGTACATGGACGTTGTAGGGAAGCTCAAACACCCCAACATTGTTAGACTCCGAGCTTATTACTATGCCAAGGAAGAAAAGCTTCTTGTGTATGATTATCTCCCCAATGGAAGCTTACATGCTCTTCTTCACGGTAACCGTGGACCTGGAAGGATTCCATTGGATTGGACAACGAGAATAAGCTTGGTGTTAGGTGCGGCTAGAGGGTTGGCTAGGATTCATGCAGAGTACAACGCGTCCAAGATACCTCACGGAAACGTCAAATCCTCCAACGTGCTTCTCGACAAAAACGGCGTCGCTTTGATCTCCGACTTCGGGTTATCACTGTTGTTGAACCCAGTTCACGCGATCGCGCGGTTGGGAGGGTACAGAGCTCCGGAGCAGGTTGAAGTGAAAAGGCTGTCGCAGGAGGCTGACGTGTACGCTTTCGGGGTGTTGGTGTTGGAGGTGTTGACGGGGAGGGCACCGTCGACGCAGTACCCTAGTTCCGCTGCCCGTCCGCGCGTGGAGGAGGAGGGTGAGGTGGATCTTCCGAAGTGGGTTGGGTCGGTGGTGAAGGAGGAGTGGACCGCTGAGGTGTTCGACGAAGAGCTGTTGCGGTACAAGAACATCGAGGAGGAGCTGGTGGCGATGTTGCACGTGGGAATGTCGTGCGTGGCGGCGCAACCGGAGAAGAGGCCGAGTATGTTGGAGGTTGTGAAGATGGTTGAGGATCTGAGGGTGGAACAGTCTCCTCTGGGAGAGGATTATGATGAGGCACGGTCACGCACTTCGCTTTCGCCTTCCCTTCCCACCACCGAAGATGGCCTTGCTTAA 2052 0.5556 MKDPSSINLSLPLALALPFALTILCVAESAWQNDTLALTQFRLQTDTHGNLLSNWTGDDACSAVWLGVECSPNGRVVGLSLPSLNLRGPIDSLSSLVYLRFLDLHENRLNGTVSPLLNCTALELLYLSHNDFSGEIPPQISSLRLLLRLDISDNNIRGPIPDQLAKLTHLLTLRLQNNALSGHVPDLSASLLNLTQLNITNNELRGHVPDSMLVKFGNASFSGNHALCGSTPLPKCSETEPDTETTITVPSKPSSFPQTSSVTLSDTPKKKGLSAGVIVAIVVAVCVAVLVAMSFVVAHCCARGGGGYGSAVGSESGKRKSGSSSGSEKKVYGNGGNFDRESDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGCLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYNASKIPHGNVKSSNVLLDKNGVALISDFGLSLLLNPVHAIARLGGYRAPEQVEVKRLSQEADVYAFGVLVLEVLTGRAPSTQYPSSAARPRVEEEGEVDLPKWVGSVVKEEWTAEVFDEELLRYKNIEEELVAMLHVGMSCVAAQPEKRPSMLEVVKMVEDLRVEQSPLGEDYDEARSRTSLSPSLPTTEDGLA* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00591 683 MobiDBLite consensus disorder prediction 235 269 - -
Lapu6g00591 683 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 653 IPR046959 -
Lapu6g00591 683 MobiDBLite consensus disorder prediction 236 268 - -
Lapu6g00591 683 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Lapu6g00591 683 CDD STKc_IRAK 376 651 - -
Lapu6g00591 683 ProSiteProfiles Protein kinase domain profile. 370 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00591 683 Gene3D Ribonuclease Inhibitor 144 273 IPR032675 -
Lapu6g00591 683 Gene3D Ribonuclease Inhibitor 33 143 IPR032675 -
Lapu6g00591 683 Pfam Protein kinase domain 374 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00591 683 SUPERFAMILY Protein kinase-like (PK-like) 374 648 IPR011009 -
Lapu6g00591 683 Gene3D Phosphorylase Kinase; domain 1 339 445 - -
Lapu6g00591 683 SUPERFAMILY L domain-like 32 212 - -
Lapu6g00591 683 Gene3D Transferase(Phosphotransferase) domain 1 446 668 - -
Lapu6g00591 683 FunFam pollen receptor-like kinase 1 340 445 - -
Lapu6g00591 683 FunFam Nuclear pore complex protein NUP107 31 186 - -
Lapu6g00591 683 MobiDBLite consensus disorder prediction 656 683 - -
Lapu6g00591 683 MobiDBLite consensus disorder prediction 307 349 - -
Lapu6g00591 683 MobiDBLite consensus disorder prediction 316 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00591 Lapu-Chr6 6153654 6156291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00591 32 679 Receptor kinase-like Gene Family AT2G36570 66.365 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu6g00591 Pkinase 8.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00591 - - gmx:100808402 1110.52