Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00573 ATGGGATTTGAACAGGACACAGTTCTGGTACCTCCGTGGCTTGAACAGCTTCTTCAGACGCCTTTCTTCAATGTGTGTCGGATTCACGCTGACGCAGCTAGGAGTGAATGTAACATGTTTTGTCTAGATTGCAATGGCGAAGCCTTTTGTTTTTATTGCCGTTCTTCTCGACACAAAGATCATCGAGTGATTCAGATAAGAAGATCTTCGTATCATGATGTAGTGAGGGTGGCTGAAATCCAGAGGGTGTTGGACATAAGTGGAGTGCAGACATATGTGATAAACAGTGCTCGAGTTTTGTTCTTGAATGTGAGGCCTCAACCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGCTTGAAGGAATAAAGAAAAACGGGGATGCAAGCTTTGCTTTGGAGGGTAGGAACGAAGAATTGACAATGGATGATACTACGACCACTACTTCAACTTCAAGGGGATCAGTGTCATCAAGACAGCAAGAAGAAGGATTGCGTGAAGGTTCAACACAAGACATGTATCCAACCACGCCTCCTTCAAACGCAAGGAGAAGAAAAGGAATTCCCCATAGGTCTCCTTTTGCCTCCTAA 645 0.445 MGFEQDTVLVPPWLEQLLQTPFFNVCRIHADAARSECNMFCLDCNGEAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVAEIQRVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLEGIKKNGDASFALEGRNEELTMDDTTTTTSTSRGSVSSRQQEEGLREGSTQDMYPTTPPSNARRRKGIPHRSPFAS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00573 214 MobiDBLite consensus disorder prediction 160 182 - -
Lapu6g00573 214 SUPERFAMILY B-box zinc-binding domain 22 67 - -
Lapu6g00573 214 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 212 - -
Lapu6g00573 214 MobiDBLite consensus disorder prediction 153 214 - -
Lapu6g00573 214 Pfam PLATZ transcription factor 67 138 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00573 Lapu-Chr6 5988827 5990881 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lapu6g00573 PLATZ 1.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00573 - - gmx:100803076 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00573 6 5988827 5990881 Lapu6g00573 6 5988827 5990881 ECH
Lapu6g00573 6 5988827 5990881 Lapu7g01094 7 21995192 21996346 PCT