Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00544 ATGGTGGTGGCAGAGTTGAGTAGTAGGGGTTTGAGAGGAATGAAGAATTTCAGCTACCATGTTATCACCGGGCGCTGGTTCATGCTATTTGCATCTTTACTTATCATGTCCGTTGCAGGGGCAACCTATATGTTTGGGATATACTCTAACGAGATCAAAACCACTTTAGGGTACGACCAGTCCACTCTCAACTTGCTCGGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCGTATCCGGGTTGGTCAACGAGATAACACCACCCTGGGTGGTACTCTCGATGGGGGTCCTTATGAACTTCTTTGGCTACTTCATGATATGGCTTGCAGTCTCTGGCCGCATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACCTTTGCCAACACTGGTGCTTTAGTCACATGTGTCAAGAACTTCCCAGGAAGTCGTGGCAGTCTTTTAGGCCTACTCAAAGGTTACGTTGGTCTTAGTGGTGCCATCATCACACAGCTCTACCATGCCTTCTATGGTGATCACAACCCTCAGGCCCTTATCTTACTCATTGCTTGGCTCCCTGCTGCCGTTTCCTTCATTTTCCTTCCAACAATTCGGATATTCAACACAGTCCACCAACCCAAGAACAACAGAGTTTTCTACCACCTTCTATATATTTCACTTTGCCTTGCAGGATTTCTCATGGTTTTGATCCTTGTACAAAACAAGCTTAGTTTCTCGAGGATTGAGTACATAGTCGATGGCCTTGTGGTTCTCTCTTTTCTTCTTCTCCCACTGGCTGTGGTATTTAGGGAGGAGGTAAACCATTTGAAAGCCAAAGCGCAAGGTTTGACCGATCCAGCACCCGAGTTGAAAGTAGTCACTGAAGTTATTTCCCCTCCAAACGTCGAGCAAGAAGTACTCTCAACTACCACAAGTCCAGACGAGAAAAGTTCTTGTTTCAGGAACATACTCAGCCCCCCAAAGAGGGGAGAAGACTACACCATTTTGCAAGCACTTTTCAGTGTGGATATGCTGATTTTGTTCGTTGCAACAACGTTTGGTGTTGGCGGAACATTAACAGCCATAGACAATCTAGGGCAGATTGGAAACTCATTGGGTTACCCGAGTAAGAGCACGACAACCTTTGTGTCCTTGGTGAGCATATGGAACTACTTAGGAAGAGTAGCTGCAGGTTATGCCTCTGAAATCCTCTTAACCAAATACAAAGTCCCTCGTCCCTACATGGTCACTCTAGTTTTGCTTCTCTCTTGTGTTGGCCATATTCTGATAGCCCTTGGCGTCCCTAACTCTCTCTACCTGTCTTCAGTGATTATTGGGTTTTGTTTTGGAGCTCAGTGGCCACTGGTGTTTGCAATCATATCAGAAATATTTGGCCTTAAATACTACTCCACGTTATACAACTTAGGAGCGGCAGCAAGCCCTGTTGGATCTTACATTCTAAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACAATTGAAGGCCAAAGGACTGACGAGAGAAGCAGGGAAGGACCTAACTTGTGTAGGAGTGCAATGCTACAGAATGGCTTTTATCATAATAACAGCTTCAACGTTGGTTGGGTGTTTAGCCTCGTTCATTTTGGCGTTGAGGACTAGAAAATTTTACAAAGGGGATATCTACAGAAAGTTTAGAACGGAACATGAAACAACAGAGAATGAGAGGGAGATTACAAAGACTGGTGTTTGA 1749 0.4483 MVVAELSSRGLRGMKNFSYHVITGRWFMLFASLLIMSVAGATYMFGIYSNEIKTTLGYDQSTLNLLGFFKDLGANVGVVSGLVNEITPPWVVLSMGVLMNFFGYFMIWLAVSGRIAKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSLLGLLKGYVGLSGAIITQLYHAFYGDHNPQALILLIAWLPAAVSFIFLPTIRIFNTVHQPKNNRVFYHLLYISLCLAGFLMVLILVQNKLSFSRIEYIVDGLVVLSFLLLPLAVVFREEVNHLKAKAQGLTDPAPELKVVTEVISPPNVEQEVLSTTTSPDEKSSCFRNILSPPKRGEDYTILQALFSVDMLILFVATTFGVGGTLTAIDNLGQIGNSLGYPSKSTTTFVSLVSIWNYLGRVAAGYASEILLTKYKVPRPYMVTLVLLLSCVGHILIALGVPNSLYLSSVIIGFCFGAQWPLVFAIISEIFGLKYYSTLYNLGAAASPVGSYILNVKVAGVLYDKEALKQLKAKGLTREAGKDLTCVGVQCYRMAFIIITASTLVGCLASFILALRTRKFYKGDIYRKFRTEHETTENEREITKTGV* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00544 582 Gene3D MFS general substrate transporter like domains 336 556 IPR036259 -
Lapu6g00544 582 Pfam Nodulin-like 25 271 IPR010658 -
Lapu6g00544 582 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 26 562 - -
Lapu6g00544 582 FunFam Nodulin family protein 337 558 - -
Lapu6g00544 582 CDD MFS_Mch1p_like 24 542 - -
Lapu6g00544 582 SUPERFAMILY MFS general substrate transporter 24 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00544 Lapu-Chr6 5690474 5692850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00544 14 567 Nodulin-like Gene Family AT2G39210 65.187 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00544 - - gmx:100797779 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00544 6 5690474 5692850 Lapu7g02446 7 40856880 40858803 ECH
Lapu6g00544 6 5690474 5692850 Lapu6g00544 6 5690474 5692850 ECH