Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00529 ATGGAGGTTGGAAAGAAGAAGATGCTCAAGTCTTTGATCTCAAAGGTGATAAAGGGTCTTCCATTCTTGGCACCCAATGGAGCACGTACTACGAAAAGGGTTTGTTATTTGAGTGACATTGATGAGGAAAACGAAAATGCAACAAGGGTGCCCGAAGATGTTAAGGAAGGACATTTTGCGGTTATTGCAATGCAAGGTGAAGAAACCAAAAGGTTCGTCGTTGAGTTAGATTATTTAACTGATCCTGCTTTCTTGAAGCTGCTGGAGCAAGCCAGTGAAGAGTACGGCTTTGAACAAAAGGGTGCACTTGCAGTTCCTTGCAGCCCCCAAGAACTTCAGAAGATTATAGAGAATAAACGACTCAATGCCACTTCCTAG 378 0.4312 MEVGKKKMLKSLISKVIKGLPFLAPNGARTTKRVCYLSDIDEENENATRVPEDVKEGHFAVIAMQGEETKRFVVELDYLTDPAFLKLLEQASEEYGFEQKGALAVPCSPQELQKIIENKRLNATS* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00529 125 Pfam Auxin responsive protein 38 116 IPR003676 GO:0009733
Lapu6g00529 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00529 Lapu-Chr6 5487821 5488198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00529 39 107 Calmodulin-binding Proteins AT5G20810 44.928 2.17e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00529 - K14488 gmx:102661602 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00529 6 5487821 5488198 Lapu6g00529 6 5487821 5488198 ECH