Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00524 ATGAAGTGTTTTACATTCTCCTATGGAGAGAAGAAAGATGAGCCAAAAGGCTTGCGGTCAACATCGGGCCGGTCAGAGAATTCCACGTATGCTGATATTAGAAGATCTGGTTCTGAGTTAAACTCTCAGGAAGTTTCAGACAATGGCAGCACAGAATCCCTCAGGAGGAATGCAACACCCAGTTTGTCCCAGAGGGCCAGCAACCTCAGAGTGTTTACTGTTTCTGAACTGAAATCAGCCACAAAGAATTTTAGTCGCTCTGTTATGATTGGAGAGGGCGGGTTTGGGTGTGTCTACCTGGGATTGATTAAAAGTGTGGAGGTTCCCTCCGGAAGAATTGAAGTTGCAGTTAAACAGCTTAGTAAAAGGGGGATGCAGGGGCACAGGGAATGGGTGACAGAAGTGAATGTTCTGGGCGTTGTTGAGCATCCAAATCTTGTGAAACTAGTGGGTTATTGTGCAGACGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAACACCATTTATCTCACCGATCAGAGGCTCCTCTCTCATGGAGTAGGAGATTGAAAATAGCTCGAGATGCAGCTCGCGGATTAACATACCTGCATGAAGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGAACAATGGAATGCGAAGCTGTCAGACTTTGGGTTAGCAAGGTTGGGACCATCAGATGGACTGACTCATGTCTCAACCGCGGTTGTGGGAACAATCGGATATGCATCTCCAGAATATGTTCAAACTGGACGTCTAACATCAAAGAATGATGTGTGGAGCTACGGTGTCTTCCTTTATGAACTCATCACCGGTAGGCGCCCTTTAGATCGAAATCGCCCCAGGGGTGAGCAGAAGCTCTTGGAATGGATAAGGCCATACCTATCAGATGGCAAGAAATTTCAACTAATATTAGACCCAAGACTTGATAAGAAACAAATCCTCAAATCAGCCCAGAGACTTGCTATGATAGCAAACAGATGCTTGGTAAAAAATCCAAAGAATCGCCCAAAGATGAGTGAGGTATTGGAAATGGTGAATGGGATGGTAGAATCTTCTTCATTCAGTTCTAGTCCACAGTTGCCCTTGAGGAGTGTGGCAAGAGTGGAAACTTCCCAAGATACTGAAACAAATAACAAGAAACGGACCATTGATCAGAAGCCTGGAGAAAGTAATTGTTTCGTTAGGATGTGGAGACCAAAGCTTGTAAGAACATGTTGA 1278 0.439 MKCFTFSYGEKKDEPKGLRSTSGRSENSTYADIRRSGSELNSQEVSDNGSTESLRRNATPSLSQRASNLRVFTVSELKSATKNFSRSVMIGEGGFGCVYLGLIKSVEVPSGRIEVAVKQLSKRGMQGHREWVTEVNVLGVVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRSEAPLSWSRRLKIARDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTIGYASPEYVQTGRLTSKNDVWSYGVFLYELITGRRPLDRNRPRGEQKLLEWIRPYLSDGKKFQLILDPRLDKKQILKSAQRLAMIANRCLVKNPKNRPKMSEVLEMVNGMVESSSFSSSPQLPLRSVARVETSQDTETNNKKRTIDQKPGESNCFVRMWRPKLVRTC* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00524 425 MobiDBLite consensus disorder prediction 1 20 - -
Lapu6g00524 425 Pfam Protein tyrosine and serine/threonine kinase 89 363 IPR001245 GO:0004672|GO:0006468
Lapu6g00524 425 MobiDBLite consensus disorder prediction 21 62 - -
Lapu6g00524 425 MobiDBLite consensus disorder prediction 374 392 - -
Lapu6g00524 425 Gene3D Phosphorylase Kinase; domain 1 55 169 - -
Lapu6g00524 425 SUPERFAMILY Protein kinase-like (PK-like) 61 365 IPR011009 -
Lapu6g00524 425 MobiDBLite consensus disorder prediction 374 406 - -
Lapu6g00524 425 FunFam Serine/threonine-protein kinase BIK1 51 169 - -
Lapu6g00524 425 Gene3D Transferase(Phosphotransferase) domain 1 170 381 - -
Lapu6g00524 425 ProSitePatterns Protein kinases ATP-binding region signature. 90 118 IPR017441 GO:0005524
Lapu6g00524 425 MobiDBLite consensus disorder prediction 1 62 - -
Lapu6g00524 425 FunFam Serine/threonine-protein kinase PCRK2 170 379 - -
Lapu6g00524 425 CDD STKc_IRAK 90 368 - -
Lapu6g00524 425 ProSiteProfiles Protein kinase domain profile. 84 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00524 425 PANTHER OS01G0588500 PROTEIN-RELATED 48 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00524 Lapu-Chr6 5436143 5441718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00524 1 379 Glycoside Hydrolase AT3G07070 40.152 1.32e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu6g00524 PK_Tyr_Ser-Thr 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00524 - - gsj:114400704 770