Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00522 ATGAAGGGGAAGTTTCTGAGAGGGTGTCTTAACAAGTGGAAGAAAGTGGGGAATCGAGTAATCCACTGTGCTGCCTACAGTTACTGCTGCGAATGGGAAGTGTGGCCATCCATGCACAATGAGGGAGAATCCGATATTCCCAACGATGTGCCAAAGGGTCACTTGGTTGTGTACGTGGGAGAACACCACAAGAGATATGTGATCAAGATCACGCTGCTCAACCATCCTCTCTTCAAGACCTTGCTGGATCAGGCTCAGGATGAGTACGATTTCATTGCAGATTCGAAGCTCTATATTCCTTGCACTGAGCATCTTTTCCTCACTGTCCTTCGCTGTGCAAGCTCTCCACATAATGAACGACTCTCTCTGTGTGTCTGA 378 0.4788 MKGKFLRGCLNKWKKVGNRVIHCAAYSYCCEWEVWPSMHNEGESDIPNDVPKGHLVVYVGEHHKRYVIKITLLNHPLFKTLLDQAQDEYDFIADSKLYIPCTEHLFLTVLRCASSPHNERLSLCV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00522 125 Pfam Auxin responsive protein 41 112 IPR003676 GO:0009733
Lapu6g00522 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00522 Lapu-Chr6 5423438 5423817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00522 44 120 Calmodulin-binding Proteins AT4G34750 45.679 9.18e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00522 K14488 - gmx:100814645 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00522 6 5423438 5423817 Lapu6g00522 6 5423438 5423817 ECH