Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00519 ATGACAGATACTTCTCCGGTGAAGCAGACTGTTGTCTGTGACATGAGCAATCAGACTCTTGTTATGGATGAAGATGAAGGGGATGCTCGTTCTAGGTGCATTGAGGGATTCGCCAAAGAGTATAAGGATAATGCACAGGCAAATCCTAATATGAAAGATAAAAAAGTCGGCAAGGAAGTTGTATGTTCCAATTGCTTGCTTGGTGGAGTACTTTTATGTTGCTCTGGAAAAGGATGCCAGAGGAGGTACCATCCCTCTTGTGTGGATCCTCCTCTCAAGTTCATTCCTTTGGGGTTTTGGCACTGTAATTGGTGCACTAAGAAGAAAATAGAGTCTGGTGCGCATTCGGTTTCTGAAGGAGTGAAATCCATCTTGAATTCTAGAGAAGTGGTTTCGAACAATGAAGGTATGGCCTATAAAATTCCCCTGCCTGAATTTTGCTAA 444 0.4279 MTDTSPVKQTVVCDMSNQTLVMDEDEGDARSRCIEGFAKEYKDNAQANPNMKDKKVGKEVVCSNCLLGGVLLCCSGKGCQRRYHPSCVDPPLKFIPLGFWHCNWCTKKKIESGAHSVSEGVKSILNSREVVSNNEGMAYKIPLPEFC* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00519 147 ProSiteProfiles Zinc finger PHD-type profile. 59 108 IPR019787 -
Lapu6g00519 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 119 IPR013083 -
Lapu6g00519 147 PANTHER PHD FINGER PROTEIN 42 109 - -
Lapu6g00519 147 SUPERFAMILY FYVE/PHD zinc finger 49 109 IPR011011 -
Lapu6g00519 147 ProSitePatterns Zinc finger PHD-type signature. 62 105 IPR019786 -
Lapu6g00519 147 SMART PHD_3 61 106 IPR001965 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00519 4 118 PHD Transcription Factor Family AT5G35210 31.897 5.50e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00519 - K11643 oeu:111400121 109.383