Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00487 ATGGGGAGGAAGGGAAATTGGTTTTCAAGCGTGAAGAAAGCTCTCAGCCCCGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGTCTCATACTCAGAAGCTGATAAGCTGCCGCCGCCGCCGCCACCACCACCACCTGTTCCTCCGCCAGAAGAGATTAAATTAACTGATATTGAAAATGAAATCAGTCATGGTCATGATCATGTTGTTGAGATTGTAACTGCCGTTGAAGCCGAGGCACCCGTGCCTCCTGTCCAGATAGAAACTGTTGGGGTTGAAGCTGCCCGAACTCCTCGTTTTGCCGGTAAACCGAATGATGAAGTGGCAGCAATCAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTGATGGAAGGGTCGGTTGTAAAACGTCAAGCCACAAGTACCCTGCGATCTATGCAGACATTGTCTCGCTTGCAGTCTCAGATTCGTTCCAGGAGGATCAGGATGTTGGAGGAGAATCAGGCTTTGCAGAGACAGCTCTTACAGAAGCATGCAAGAGAGCTTGAGAGTTTGCGGATGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGCGAAGAGAAAGAGCATTGGCTTATGCATTCACGCATCAGCAAAACTGGAAGAACTCATCTAGATCTTTAAATCCAATGTTCATGGATCCAACCAATCCTGCATGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGGCCATGGGAGAACCGTGGCCAGATGGATAAAGAGTTGAATGACCATGCGTCCGTGAAAAGCTCAAGCCGTAGTATTACTGGTGGAGAAATCAGCAAGTCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCACTCTCCATCAGCCAGCCAAAATCCTGGCTCACCTACCTTTCAGTCCACTCCTCCAAAGCGAGTTTCTGCATCTGCTAAGAAACCAAAGAAGGCAAGTCCAAGGGGCAGCTGGATTACGGATGAGGACTCTAAAAGCTTGGTTAGTGTACAGTCAGACCGGTTCCGGAGGCACTCAATCGCGGGTTCATCGGTGAGAGATGACGAGAGCCTTGCTAGCTCTCCAGCAATTCCAAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCCATTAGCCCCAGAAAATGGAAAAACTGAGAAAGGATCCTTTGGGACTGCAAAGAAGCGGCTATCTTTCCCAGCTTCACCTTCTAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTAGAAATCAGCTTAAATGCCGAGTTAACTGTGGACAAGGTTGTGGACAGTTGA 1434 0.4791 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLQTSVSYSEADKLPPPPPPPPPVPPPEEIKLTDIENEISHGHDHVVEIVTAVEAEAPVPPVQIETVGVEAARTPRFAGKPNDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGSVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSLNPMFMDPTNPAWGWSWLERWMAARPWENRGQMDKELNDHASVKSSSRSITGGEISKSFARFQLNSEKHSPSASQNPGSPTFQSTPPKRVSASAKKPKKASPRGSWITDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPAIPSYMVPTQSAKAKSRTQSPLAPENGKTEKGSFGTAKKRLSFPASPSRPRRHSGPPKVEISLNAELTVDKVVDS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00487 477 PANTHER IQ-DOMAIN 5-RELATED 1 458 - -
Lapu6g00487 477 SMART iq_5 120 142 IPR000048 GO:0005515
Lapu6g00487 477 MobiDBLite consensus disorder prediction 324 464 - -
Lapu6g00487 477 MobiDBLite consensus disorder prediction 404 428 - -
Lapu6g00487 477 MobiDBLite consensus disorder prediction 50 67 - -
Lapu6g00487 477 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Lapu6g00487 477 Pfam IQ calmodulin-binding motif 124 142 IPR000048 GO:0005515
Lapu6g00487 477 MobiDBLite consensus disorder prediction 324 349 - -
Lapu6g00487 477 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00487 Lapu-Chr6 5066215 5071223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00487 1 462 IQD Protein Family AT5G03040 54.088 4.06e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00487 - - gmx:100800080 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00487 6 5066215 5071223 Lapu6g00487 6 5066215 5071223 ECH