Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00482 ATGGAGAGCACTTTACTCTTTCTCTCCTTTCTCACGTTTCTACTCTCATCCCTACTCCACTCACCTTTTACTTCTGCTCAGATTATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTACAACAAAATTCACGGATGAAATTGGTCTTCAGTGGACTCCTGATGATAAGATTACTTATGGACAAACAAGTGCTATATCAGTTGCAAATGAGACACGGAAGCAATACATGACACTCCGACATTTTCCTGCGGATTCGAGGAAATACTGTTACACACTTGATGTTGTGAGTAGGACGAGGTATCTACTCAGGGCATCTTTCTTGTATGGGAACTTTGACAGTAACAATGTTTATCCAAAATTTGACATTTCTGTCGGGGCTACACACTGGTCTACCATTGTTATATCGGATGCCAACAGTATAGAAATTCGAGAGCTTATATTTTTGGCTTCAAGTACTACAGTGAGTGTTTGCTTATCAAATGCAACAACCGGACAACCATTCATCTCTACGCTTGAACTTCGCCAATTCAATGGTTCAGTTTATTATACAGAATTCGAGGAACACTTTTACCTTAGTGTCTCTGCAAGGATAAATTTTGGCGCAGAGAGTGATGCTCCAATTAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCGGATTCCGTGAAGAAAGCTAATTATCTCGTTGATGTTGCTGCTGGAACCAATAAAATTTCTACAGAAGCACCAATTGATGTTAACAGAGATGAAATGCCACCAGTGAAAGTGATGCAGACAGCTGTAGTGGGTACTAATGGGTCTCTAACTTACCGATTAAACTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCACCTATTTTGCCGAGATTGAAGATCTGGGTCCTGATGAGTCCAGAAAATTCAGGCTAGTACTTCCGGGCCAGCCTGATCTTAGCAAGGCAGTTGTGAATATTGAAGAAAACGCTCAAGGGAAATATCGTCTTTATGAACCAGGATTTACCAATATATCCCTACCTTTTGTGCTCTCTTTTAGATTTGGCAAGACATTTGATTCCTCTAGGGGACCTCTTCTAAATGCCATGGAGATAAATATGTATTTAGAGAAAAATGATGGTTCTCTAGATGGAGCAGCTATTTCCAGTTTACTTTCACACTACTCTACAGCAGACTGGGCCAAAGAAGGTGGTGATCCATGTCTACCCGTTCCATGGTCATGGATCCGATGTAACTCTGATCCACAACCAAGAATAGTCTCAATCTTGTTATCCAATAGAAACTTGACTGGGAATATTCCTTTGGATATCACCAAATTGGTTGGTTTGGTTGAACTATGGCTTGATGGAAATATGTTGACTGGCCCATTACCAGATTTTATTGGGTGCATGGACTTGAAGATCATTCATCTTGAAAACAATCAATTGACAGGTGTGCTCCCAACTTCTTTAGTGAACCTTCCAAGCTTGAGGGAACTGTATGTGCAAAATAACATGTTATCTGGAACAATACCATCGGATCTTCTTAGTAAGGATTTGGTTTTGAACTACTCTGGAAACCTCAATCTTCACAGAGAAAGCAAAATAAAGGGGCACATGTATGTTATTATTGGTTCATCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCTTGTTTATGCGTAAAGGCAAGAGAAAATATTATGAGTTTACAATCTTCGTAGACCACTCTCTTCCTGCTCAAAGGCTGGCTTCTTGGAAGAACGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATGCTACAAATAATTTTGAGAAAAAAATTGGTGCGGGTGGTTTTGGAGTTGTCTACTATGGGAAGCTAAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTAACTCTTCTTTCAAGAATACATCATAGAAATTTGGTACAGCTGCTTGGTTATTGTCGAGATGAAGAGAATAGTATGCTTGTCTATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGCCCATTAGCGAATGAAAGGAGTATCAATTGGATTAAGCGTCTTGAGATTGCTGAAGATGCTGCCAAAGGGATTGAATATCTTCATACGGGTTGTGTTCCTGTCGTTATCCATAGAGACTTAAAAAGCAGCAATATTCTTCTCGACAAGCACATGAGAGCCAAGGTTTCTGATTTTGGTCTTTCTAAACTTGCTGTTGATGGAGTCTCCCATGTTTCAAGCATAGTTCGGGGAACAGTAGGATACCTGGATCCCGAGTACTATATTTCCCAACAGCTGACAGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTCCTAGAACTCATGTCTGGTCAAGAAGCAATATCAAATGAAAGCTTTGGTGTAAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATTATCGATCCCTTGTTGCACAATGATTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAGCCTCATGGACATATGCGACCGTCAATTTCTGAAGTTTTAAAGGAGATCCAAGATGCCATATCTATTGAAAGACAGGCAGAAGCGTTAAGAGAAGGGAATTCAGATGATATGTCAAAAAATTCTTATCACTCGTCCTTGAACATGGGTTCAATGGATCTAGTTGGAACTGAGAGTTACCTGTCAATTGATGAATCAGTTGCACAGCCAACAGCAAGATAG 2799 0.3998 MESTLLFLSFLTFLLSSLLHSPFTSAQIMQGFVSLDCGGTTKFTDEIGLQWTPDDKITYGQTSAISVANETRKQYMTLRHFPADSRKYCYTLDVVSRTRYLLRASFLYGNFDSNNVYPKFDISVGATHWSTIVISDANSIEIRELIFLASSTTVSVCLSNATTGQPFISTLELRQFNGSVYYTEFEEHFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTNKISTEAPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLGPDESRKFRLVLPGQPDLSKAVVNIEENAQGKYRLYEPGFTNISLPFVLSFRFGKTFDSSRGPLLNAMEINMYLEKNDGSLDGAAISSLLSHYSTADWAKEGGDPCLPVPWSWIRCNSDPQPRIVSILLSNRNLTGNIPLDITKLVGLVELWLDGNMLTGPLPDFIGCMDLKIIHLENNQLTGVLPTSLVNLPSLRELYVQNNMLSGTIPSDLLSKDLVLNYSGNLNLHRESKIKGHMYVIIGSSVGASVLLLATVISCLFMRKGKRKYYEFTIFVDHSLPAQRLASWKNDDPAEAAHCFSFSEIENATNNFEKKIGAGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEENSMLVYEFMHNGTLKEHLYGPLANERSINWIKRLEIAEDAAKGIEYLHTGCVPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPLLHNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIERQAEALREGNSDDMSKNSYHSSLNMGSMDLVGTESYLSIDESVAQPTAR* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00482 932 Pfam Leucine rich repeat 459 499 IPR001611 GO:0005515
Lapu6g00482 932 SMART serkin_6 604 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00482 932 Pfam Malectin-like domain 35 364 IPR024788 -
Lapu6g00482 932 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 680 889 - -
Lapu6g00482 932 ProSiteProfiles Protein kinase domain profile. 604 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00482 932 Gene3D Ribonuclease Inhibitor 379 531 IPR032675 -
Lapu6g00482 932 Pfam Protein tyrosine and serine/threonine kinase 606 806 IPR001245 GO:0004672|GO:0006468
Lapu6g00482 932 SUPERFAMILY Protein kinase-like (PK-like) 590 874 IPR011009 -
Lapu6g00482 932 FunFam Leucine-rich repeat receptor-like protein kinase 582 679 - -
Lapu6g00482 932 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Lapu6g00482 932 SUPERFAMILY L domain-like 403 519 - -
Lapu6g00482 932 CDD STKc_IRAK 610 877 - -
Lapu6g00482 932 PANTHER OS07G0107800 PROTEIN-RELATED 465 880 - -
Lapu6g00482 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Lapu6g00482 932 Gene3D Transferase(Phosphotransferase) domain 1 680 903 - -
Lapu6g00482 932 Gene3D Phosphorylase Kinase; domain 1 580 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00482 Lapu-Chr6 5017552 5025142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00482 23 714 Receptor kinase-like Gene Family AT2G37050 68.338 0.0 1000
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu6g00482 Malectin_like 2.8e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00482 - - gmx:100784017 1731.46