Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00469 ATGGTTAGATTCTGCTGGAAGCCAGCTTCTGTAGGTGATGATGGAGATGTAAATGGGAGAGTTGAGGGGCTGCTATGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTGATTCAAGCTAATAGTTCATTGGAGGATCGTAGCCAACTTGAATCTGGACCCTTGACTTCTGACTATTTGGGTCCCCAAGGAACCTTTATTGGTGTATATGATGGTCATGGTGGTACTGCAGCCTCACAGTTTGTCAGTGAGAATCTCTTCGGCAATATCAAGAGTTTCGCAGCTGATCATCAAGGCATATCAGAGAACGTTATACGAAGGGCCTTTTCTGCAACAGAAGAGGGTTTTCTGTCTGTTGTGAAGAAACAGTGGCTAAGCAAGCCACAGATTGCATCCACTGGTACATGTTGTTTGGCGGGGATAATTTGCAATGGCATGCTATATGTTGCAAATGCAGGAGACTCAAGGGTGGTGTTGGGGAGAGTAGAGAGAGCAACAAGGGAAACAACAGCTATCCAATTGTCTGCAGAGCACAACGTTAACTTCCAAATGGAGAGAGATGAACTTCGGACAAAGCACCCCCATGATCCACAAATCGTGGTTAAGAAACACAATGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCAAGATCCATAGGTGATGCATATCTGAAGAAAGAAGAATTTAACAGGGAGCCTCTACCGTATAAGTTTAGACTACCCGAACCCTTCTTTAAGCCAATTCTTAGTTATGAACCAGCAATATCAGTGCATAAACTTGGCCCTGAAGATCAATTTCTCATCTTTGCTTCTGATGGTTTGTGGGAGCAACTTAGCAACCAAGAAGTTGTGAATATAGTCAGCAATAATCCACGCAATGGTATTGCTAGGCGACTTGTGAAAGCTGCACTTCGAGAAGCAGCTAGGAAGAGAGAAATGAGAGTGTCAGACCTGCAAAAGATTGAACAAGGAGTGAGGAGACACTTCCACGATGATATTACAGTTATTGTTGTATATCTAAATCCCAAACTCATAGATAATAGCTCTCTATTGGCTTCTCCTCTTTCAATCAGAGGAGGTGGGTAG 1101 0.436 MVRFCWKPASVGDDGDVNGRVEGLLWYKDLGNHLYGEFSMAVIQANSSLEDRSQLESGPLTSDYLGPQGTFIGVYDGHGGTAASQFVSENLFGNIKSFAADHQGISENVIRRAFSATEEGFLSVVKKQWLSKPQIASTGTCCLAGIICNGMLYVANAGDSRVVLGRVERATRETTAIQLSAEHNVNFQMERDELRTKHPHDPQIVVKKHNVWRVKGLIQVSRSIGDAYLKKEEFNREPLPYKFRLPEPFFKPILSYEPAISVHKLGPEDQFLIFASDGLWEQLSNQEVVNIVSNNPRNGIARRLVKAALREAARKREMRVSDLQKIEQGVRRHFHDDITVIVVYLNPKLIDNSSLLASPLSIRGGG* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00469 366 Pfam Protein phosphatase 2C 69 314 IPR001932 -
Lapu6g00469 366 CDD PP2Cc 35 345 IPR001932 -
Lapu6g00469 366 SUPERFAMILY PP2C-like 46 346 IPR036457 -
Lapu6g00469 366 Gene3D - 28 354 IPR036457 -
Lapu6g00469 366 FunFam Phosphatase 2C family protein 26 355 - -
Lapu6g00469 366 SMART PP2C_4 31 343 IPR001932 -
Lapu6g00469 366 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Lapu6g00469 366 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Lapu6g00469 366 PANTHER PROTEIN PHOSPHATASE 35 344 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00469 Lapu-Chr6 4903821 4906645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00469 1 366 PP2C-type Phosphatase Gene Family AT3G12620 66.667 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00469 K01102 - gmx:100815902 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00469 6 4903821 4906645 Lapu6g00469 6 4903821 4906645 ECH
Lapu6g00469 6 4903821 4906645 Lapu7g00875 7 10536917 10553725 PCT