Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00463 ATGTCTCGTCTAACGCCGCCGCCATCACAACCCAACGCTATCCTCGACGATAGGCTTCCTTTCTTCAACCAATCCATGGACCTAGTCCAGCTCCCGAACCCGGCCACAACCCGAACCAGATCCCGCACCCTCGCTGATCTCCTAAACCGCGTCCAAGACGCCCAAAACGACACACCACCTGCACCACCTCACCATGTTCTTGACCTCTCCCCCTCTCCCACCACCCACCCCTTTGTCCTCTCCTTCTCCAACTTAACCTACAGCGTCAAGCTTCGCCGCAAGTTCAATTTCTTTCCCGCCACCACCGTTTCCCCGCCCGACCTCGAAACCAAACTCAACAGCACCAAGACTCTCCTCAACGACATCTCCGGCGAGGCCAGGGACGGCGAGATCATGGCTGTTCTCGGCGCCAGCGGCTCTGGCAAGTCCACTCTCATCGACGCCCTCGCCAACCGCATCTCAAAGGAAAGCCTCAAAGGTACAGTCACCCTAAACGGCGACGTTTTAGACTCCAGTCTTTTGAAGGTGATTTCCGCTTACGTCATGCAAGATGACCTTCTCTTCCCCATGCTCACTGTCGAAGAAACGCTCATGTTCGCCGCAGAGTTCAGACTCCCTCGCTCCCTCTCCAAATCCAAGAAGAAAGCACGCGTCCAGGCCTTGATAGACCAGCTCGGTCTCCGCTCCGCCGCCTCCACCGTCATCGGCGACGAGGGCCACCGCGGTGTCTCCGGTGGCGAGCGCCGCCGCGTCTCCATTGGAATCGATATCATCCACGACCCCATCGTGCTCTTCCTCGACGAACCTACTTCCGGCCTCGACTCCACCAGCGCCTTCATGGTGGTGAAAGTGCTTCAGCGCATCGCTCAGAGCGGAAGCATCGTCATCATGTCCATTCACCAACCTAGCTACAGAATCTTAGGCTTGTTGGACCACTTGATCTTCCTTTCCCACGGTAACACCGTCTACAGCGGCTCTCCGGCTAACCTCCCCGCCTTCTTCTCCGAGTTCGGCCACCCCATACCGGAGAACGAGAACCGCACCGAATTCGCGCTCGACCTAATTCGCGAACTCGAAGAACAGCCCGGCGGGACTAAGAGTTTAGTGGACTTCAACAAGTCGTGGCAGCTGAAAGAAATAAACTCGGCCCAGGCCCAGACCCGAGCCCAAAATGAGCCCAAACCTAAACCATCTCTGAAGGACGCCATCAGCGCAAGCATTTCGAGAGGGAAACTCGTGTCCGGCGCTAACGGTAACGTGAAGAACTCAACGGCAGCAGTTTCCGTTCCCGCCTTCGCGAATCCGTTTTGGATGGAAATGGCGGTGATAGGAAAACGGTCTCTAACGAACTCACGGAGGATGCCGGAGCTGTTCGGGATTCGTTTGGGTGCAGTTCTTGTGACGGGTGCAATCCTGGCAACAATCTTCTGGCACCTGGATGATTCACCGAAAGGGGTTCAAGAACGCGTGGGGTTCTTCGCCTTCGCCATGTCAACAACCTTTTACACCTGCGCCGAAGCCATCCCCGTGTTCCTCCAAGAGCGTTACATCTTCATGAGGGAGACCGCTTACAACGCCTACCGCCGCTCTTCCTACGTCCTCTCCCACGCAATCATCTCACTCCCCTCCCTGCTCTTTCTTTCTTTCGCCTTTGCGGCCACGACCTTCTGGGCCGTGGGCCTCGCGGGTGGCTCTTCCGGCTTTCTCTTTTACTTTCTGGTGATCGTGGCCTCGTTCTGGGCCGGAAGCTCCTTCGTGACGTTCCTCTCGGGAGTGGTGTCGCACGTGATGATAGGGTTCACGGTGGTGGTTGCGATCTTGGCCTACTTTCTTCTCTTCAGTGGGTTCTTTATCAGCAGGGACAGAATCCCTCCCTACTGGATATGGTTCCACTACCTGTCGCTGGTGAAGTACCCGTACGAGGGAGTGTTGCAGAACGAGTTCGACGTTAACTCTCCGAGGTGCTTCGTTAGGGGGATTCAGATGTTCGACAACACGCCGTTGGGGATGGTGCCGGAGACGCTGAAGGTGGAGCTGCTAAAGAGCATGAGCAAGACACTGGGCATGAACATCACGAGGTCCACCTGCGTGATCACTGGAGTGGATGTTCTGAAGCAGCAGGGAATCACGCAGCTGAGCAAGTGGAACTGCTTGTGGATCACGGTTGCTTGGGGATTCTTCTTTCGCTTCCTCTTTTATTTGACGCTGCTCTTTGGGAGCAGGAACAAGAGGAGGTAG 2238 0.5621 MSRLTPPPSQPNAILDDRLPFFNQSMDLVQLPNPATTRTRSRTLADLLNRVQDAQNDTPPAPPHHVLDLSPSPTTHPFVLSFSNLTYSVKLRRKFNFFPATTVSPPDLETKLNSTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRISKESLKGTVTLNGDVLDSSLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKKARVQALIDQLGLRSAASTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDHLIFLSHGNTVYSGSPANLPAFFSEFGHPIPENENRTEFALDLIRELEEQPGGTKSLVDFNKSWQLKEINSAQAQTRAQNEPKPKPSLKDAISASISRGKLVSGANGNVKNSTAAVSVPAFANPFWMEMAVIGKRSLTNSRRMPELFGIRLGAVLVTGAILATIFWHLDDSPKGVQERVGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLSHAIISLPSLLFLSFAFAATTFWAVGLAGGSSGFLFYFLVIVASFWAGSSFVTFLSGVVSHVMIGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPYEGVLQNEFDVNSPRCFVRGIQMFDNTPLGMVPETLKVELLKSMSKTLGMNITRSTCVITGVDVLKQQGITQLSKWNCLWITVAWGFFFRFLFYLTLLFGSRNKRR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00463 745 Pfam ABC transporter 119 271 IPR003439 GO:0005524
Lapu6g00463 745 SMART AAA_5 128 343 IPR003593 GO:0016887
Lapu6g00463 745 FunFam ABC transporter G family member 6 108 334 - -
Lapu6g00463 745 Pfam ABC-2 type transporter 442 648 IPR013525 GO:0016020|GO:0140359
Lapu6g00463 745 ProSitePatterns ABC transporters family signature. 243 257 IPR017871 GO:0005524|GO:0016887
Lapu6g00463 745 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 61 733 - -
Lapu6g00463 745 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 103 343 IPR003439 GO:0005524
Lapu6g00463 745 Pfam ABC-2 type transporter 300 379 IPR043926 GO:0140359
Lapu6g00463 745 Gene3D - 106 334 IPR027417 -
Lapu6g00463 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 335 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00463 Lapu-Chr6 4854553 4856790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00463 42 303 Calmodulin-binding Proteins AT2G36910 26.792 4.97e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00463 K05681 - gmx:100781319 1248.8