Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00462 ATGGGGAAGGGAGGCCAAGATTATGGGAAACCAGAGAACACCAGTTCTGAAGCTTCGGACCGTGAAATCTTCAAGGCTTGGGCGAAGGACGTTCGTGAGTGCGAGGAACACTTCAAGGTGAATGTCAAAGTGGGTTTGAATAGCGAGGAGGTCGAGAATCGGCAAAAGATCTATGGATTGAACGAGTTGGAGAAGCACGACGGCCAGTCCATATGGGGTCTGATTCTGGACCAGTTCAACGACACGTTGGTTCGGATCCTCCTCGCCGCCGCCATAATTTCCTTCGTGCTCGCTTGGTACGACGGCGACGAAGGCGGTGAGATGGAGATAACGGCGTTCGTTGAGCCTCTGGTGATATTCCTCATCCTAATCGTGAACGCGATTGTTGGCGTGTGGCAGGAGAGCAATGCGGAGAAGGCGCTTGATGCGTTGAAAGAGATTCAATCGGAGCACGCGGTGGTGATTCGAGAGGGCGCCAAAATCCATAGTTTGCCGGCGAAGGATCTCGTCCCTGGCGACATCGTGGAGCTTAAGGTTGGGGATAAGGTGCCTGCAGATATGCGCGTTGTGGAATTGATCAGTTCCACTTTGCGGTTGGAGCAGGGTTCTTTGACTGGAGAAAGTGAAGCGGTGAATAAGACTAACAAGCGTGTGGAGGAGGATGCTGATATCCAGGGGAAGAGATGTATGGTTTTCGCGGGGACCACTGTTGTTAACGGGAATTGCCTTTGCATGGTCACTCAGACGGGCATGGACACGGAAATCGGGAAGGTGCATAAGCAGATACATGTGGCGTCGCAGAGTGAGGAAGATACCCCATTGAAGAAGAAGCTCAATGAGTTTGGAGAGAAGCTAACCATGATAATTGGACTTATATGTATTTTGGTTTGGCTCATTAATGTTAAGTACTTTCTTTCATGGGAGTACGTGGATGGATGGCCTAGGAATTTCAAGTTTTCTTTTGAAAAGTGTACCTATTACTTTGAGATTGCTGTGGCGCTGGCTGTGGCTGCTATTCCAGAAGGTTTGCCGGCTGTCATCACGACTTGCCTGGCTCTAGGTACTCGCAAGATGGCCCAGAAGAATGCCCTGGTTCGGAAGCTACCGAGCGTGGAGACTCTGGGTTGTACCACTGTGATCTGTTCGGATAAAACTGGTACACTCACTACCAACCAAATGGCTGTGGCGAAATTAGTCGCAATTGGCCATAATGTGGACACACTAAGAGCCTTCAAGGTGGAAGGAACTACGTACAATCCGGCTGATGGTCAAATAGTGAACTGGCCAACTGGTGGATTGGATGCTAATCTTCAGATGATAGCGAAAATAGCTGCTATATGTAATGATGCTGGAGTTGCACAATCAGAGCTTAAGTTTGTCGCCCATGGAATGCCTACTGAAGCAGCTTTAAAGGAAGCAAATGCATTTAACAGTTTTTTGTACTCTCTCTTGGGACTCCAGGTTTTGGTAGAGAAGATGGGCCACCCTGAAGGATCCATGGATGTGCGGTCGGCAAGCACAAGTACCTTGCTGCGTTGTTGCCAATGGTGGAATGAGCATGACCGACGGCTTGCTACTCTTGAGTTTGACCGTGATAGGAAGTCAATGGGGGTTATTGTGGACTCTGGTCCAGGGAAAAGGTCGCTTCTAGTTAAGGGTGCTGTGGAAAACGTTTTAGAAAGAAGCTCTAAAATTCAGTTGCGAGATGGTTCTATAGTGGACCTAGATGATAATGCTAGGAACCTTGTATTGCAAGCACTTCATGAAATGTCAACTAGTGCATTGCGCTGTTTGGGATTTGCATACAAGGATGAGCTCCCCAAATTTGAAAGCTACAGTGGCAGTGACGATCATCCAGCTCACCAGCTTTTGCTTAATCCTTCCAATTATTCATCAATTGAAAGTGAACTTATTTTTGCTGGCTTGGTTGGATTGAGGGACCCCCCAAGGGAGGAAGTATACCAAGCAATTGAAGACTGCAGAGAGGCTGGAATTCGTGTTATGGTTATAACTGGAGACAACAAGAACACTGCTGAAGCTATATGCCGTGAAATAGGTGTATTTTCCCCTGATGAAGACATTACTTCTAAAAGTGTAACAGGTAAAGATTTTATGGAACTGCGTGATAAGAAGGCCTATTTGAGACAGAGTGGCGGCCTTTTGTTTTCAAGAGCTGAACCTAGGCACAAGCAAGAAATTGTTAGGCTGCTCAAAGAGGAAGGAGAGGTGGTGGCCATGACTGGGGATGGTGTTAATGATGCACCTGCCTTGAAGCTTGCAGACATCGGTGTTGCAATGGGCATTTCAGGGACAGAGGTGGCGAAGGAGGCTTCGGATATGGTGTTGGCAGATGATAATTTTAGTTCAATTGTTGCTGCTGTTGGTGAGGGTAGATCTATCTACAATAACATGAAGGCTTTCATAAGGTATATGATCTCTTCAAATATTGGCGAGGTTGCTTCAATATTTTTAACAGCTGCGCTAGGTATTCCTGAAGGATTGATACCCGTCCAGCTTCTGTGGGTCAATCTTGTCACTGATGGACCCCCTGCAACAGCTCTAGGATTCAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCACAGTGATGACTCATTAATTAATTTGTGGATTTTATTCCGCTATCTGGTTATTGGGATCTATGTTGGATTAGCTACAGTCGGTGTCTTCATCATATGGTATACGCACGGTTCTTTCTTGGGTATTGACCTTAGTGGGGATGGACATACTCTTGTCACTTATAATCAACTTGCCAACTGGGATCAGTGCTCCTCATGGAAGAACTTCACTGCTTCTCCATTCACTGCTGGTGCTAAAACTATCACGTTTGACAACCCCTGTGATTACTTTCATACCGGTAAAGTGAAAGCTATGACATTGTCCCTTTCTGTATTGGTAGCCATTGAAATGTTCAACTCTCTCAATGCCCTATCTGAAGATGGAAGCCTTTTGACAATGCCCCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCAGTATCATTTGGTCTGCACTTTTTGATCCTGTACGTGCCATTCTTGGCACAAGTATTTGGTATCGTGCCCCTGAGCTTCAATGAGTGGCTTTTGGTTTTAGCTGTTGCACTTCCGGTCATTCTAATTGACGAGATTCTGAAATTTGTTGGGAGGTGTACAAGTGGGCCTCGACCATCAACTGCAAGAAAATCAAAGCAAAAATCAGAGTAG 3234 0.4641 MGKGGQDYGKPENTSSEASDREIFKAWAKDVRECEEHFKVNVKVGLNSEEVENRQKIYGLNELEKHDGQSIWGLILDQFNDTLVRILLAAAIISFVLAWYDGDEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALDALKEIQSEHAVVIREGAKIHSLPAKDLVPGDIVELKVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKTNKRVEEDADIQGKRCMVFAGTTVVNGNCLCMVTQTGMDTEIGKVHKQIHVASQSEEDTPLKKKLNEFGEKLTMIIGLICILVWLINVKYFLSWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVAIGHNVDTLRAFKVEGTTYNPADGQIVNWPTGGLDANLQMIAKIAAICNDAGVAQSELKFVAHGMPTEAALKEANAFNSFLYSLLGLQVLVEKMGHPEGSMDVRSASTSTLLRCCQWWNEHDRRLATLEFDRDRKSMGVIVDSGPGKRSLLVKGAVENVLERSSKIQLRDGSIVDLDDNARNLVLQALHEMSTSALRCLGFAYKDELPKFESYSGSDDHPAHQLLLNPSNYSSIESELIFAGLVGLRDPPREEVYQAIEDCREAGIRVMVITGDNKNTAEAICREIGVFSPDEDITSKSVTGKDFMELRDKKAYLRQSGGLLFSRAEPRHKQEIVRLLKEEGEVVAMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRHSDDSLINLWILFRYLVIGIYVGLATVGVFIIWYTHGSFLGIDLSGDGHTLVTYNQLANWDQCSSWKNFTASPFTAGAKTITFDNPCDYFHTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVLAVALPVILIDEILKFVGRCTSGPRPSTARKSKQKSE* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00462 1077 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 811 1064 - -
Lapu6g00462 1077 SUPERFAMILY Calcium ATPase, transduction domain A 150 261 IPR008250 -
Lapu6g00462 1077 Gene3D - 378 792 IPR023214 -
Lapu6g00462 1077 Pfam haloacid dehalogenase-like hydrolase 641 761 - -
Lapu6g00462 1077 Gene3D - 391 648 IPR023299 GO:0000166
Lapu6g00462 1077 NCBIfam HAD-IC family P-type ATPase 118 308 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu6g00462 1077 NCBIfam HAD-IC family P-type ATPase 721 828 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu6g00462 1077 NCBIfam HAD-IC family P-type ATPase 320 402 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu6g00462 1077 Gene3D - 77 1059 - -
Lapu6g00462 1077 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 391 648 - -
Lapu6g00462 1077 Pfam E1-E2 ATPase 147 361 - -
Lapu6g00462 1077 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 645 IPR023299 GO:0000166
Lapu6g00462 1077 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 251 411 - -
Lapu6g00462 1077 Gene3D - 45 265 - -
Lapu6g00462 1077 SUPERFAMILY HAD-like 379 851 IPR036412 -
Lapu6g00462 1077 Pfam Cation transport ATPase (P-type) 446 565 - -
Lapu6g00462 1077 SFLD p-type atpase 362 799 IPR044492 -
Lapu6g00462 1077 FunFam Calcium-transporting P-type ATPase, putative 642 792 - -
Lapu6g00462 1077 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Lapu6g00462 1077 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1060 IPR023298 -
Lapu6g00462 1077 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Lapu6g00462 1077 PRINTS P-type cation-transporting ATPase superfamily signature 641 652 - -
Lapu6g00462 1077 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Lapu6g00462 1077 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Lapu6g00462 1077 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Lapu6g00462 1077 PRINTS P-type cation-transporting ATPase superfamily signature 663 673 - -
Lapu6g00462 1077 Pfam Cation transporting ATPase, C-terminus 832 1057 IPR006068 -
Lapu6g00462 1077 SFLD Haloacid Dehalogenase 362 799 - -
Lapu6g00462 1077 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Lapu6g00462 1077 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Lapu6g00462 1077 FunFam Calcium-transporting ATPase, putative 127 263 - -
Lapu6g00462 1077 PANTHER CALCIUM-TRANSPORTING ATPASE 27 1066 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00462 Lapu-Chr6 4844627 4852075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00462 1 1077 Primary Pumps ATPases(2) AT1G07670 78.777 0.0 1732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00462 K01537 - gmx:100788807 1984.92