Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00456 ATGAGAAAGCTGTGTTTTAACCCCAAGACGCCGTCGTTTGCCTTGGCCCGCAATTCTCCTTCTTCGCCACAATCTTTATTCTCATGCCCAACACCGCCCAGGCTCAGCTTGTCCGAACCTAGCAGCTTCGACGAAGATAGCTTCTTGGAGGAAACGGAGGCACTCATACTGAAATGGAACCCCGACTCCTCAGCCTATGCCAAAGTCACTTCCCTATTTTACCAAGACAAAACCGAAGCCAAACACTACATTAACTGCGTTAACCAGCTTCAGCAAACCATGCATTCCTTGCTCTCTCACAACCCTTCTTCCCATAAACTCATCCTTGCTCACAACCTAATGCAGATTGCCATGAAGAGACTCAAGAAAGAGTTCTACCAGATCTTATCCATGAACCGCGCTCACCTTGACCCCGAATCAGTCTCTGCCAGATCCTCCCGCACCTCCGCCAATTCCAGCTCCTCCGATTACGAAGACGACTTCGCTGCGGAAGACGACGATATCCGCGCCGCCGGCGAATCTATCTCCGAAGTCGAGCAGGTTTCCTCAAGCGCTATGGCGGATCTGAAATTAATCGCCGACTGCATGGTCTCTTCCGGCTACGCGAAAGAGTGCGTCAGCGTTTACATCATCATCCGAAAATCCATAATTGACGAAGGAATCTACCGCCTCGGTGTTGAGAAACTTAGCTCGTCGCGCGCTAACAAAATGGATTGGGAAGTGCTTGATTTGAAAATTAAGAGTTGGTTAGAGGCAGCAAGGATTTCCGTTAGAACGCTCTTTAACGGAGAGAGAATCCTCTGCGACCACGTTTTCAGTTACTCAGATTCCGTAAGAGAATCCTGCTTCGCTGAGATTTCCAGAGACGGCGCCTCTCTCCTTTTCGGATTCCCCGAACTTGTCTCCAAAACAAAGAAATCGTCGCCGGAGAAGCTTTTCCGCGTGCTCGACATGCACGCTGTGGCTTCAGAACTGTTGCCAGAGATCGAGTCCATTTTCTCCTCCGATTACAACTCTGGGGTTCGTTCTCAGATTCTCACTTCACTTCAACGACTCACCGAGTCTGCGCAATTCTTGCTAGGAGAGTTCGAGTCCACGATCCAAAAAGACACTTCCAAGTCTGCGGTGAACGGCGGTGGCGTGCACTTGCTCACGGTTCAGACGATGAATTATCTCTCAGTCCTCGCAGATTACATCAACGTTCTTTCAGACATATTCCCGCGCGACTGGCTTCCGCCGCCGAAGTCTTCGTCGCTTCCAGAGTCCTATTTATACAGTCCGGAGTCTGACTACTCTGCGTCGACACCGGCGCTAACGGCGCGCATGGCGTGGCTGATTCTCGTCCTCCTTTGCAAGCTCGACGGCAAAGCGAAGCATTGCAAGGACGTTTCACTGTCTTACTTGTATCTCGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAATACGTGCTTGGCGACGATTGGATAACGAAGCACGAAGCTAAAGCGAAGAGGTTCGTCGCGAACTACGAGAAGGTGGCGTGGGGAGAAGTGGTTTCATCGCTGCCGGAAAATCCGGCCGCGGCGGAGGCGAGGGCAGTTTTCGAGAACTTCAACCTCAAATTCGAGGAAGCGTATCGGCAGCAGAACTCGTTCGTGGTAGCTGACAGAGAACTGCGAGACCAAATAAAAGGTTCGATCGCGAGAAGTATAGTGCCGAGATATCGCGAGTGGTATAATGCGCTGCTCGCTACGGTGGGATCAGTGAGGGACTTGACGGTGACGGAGTATGTCACGTTTACCCCTGAAGACGTTGAAAATTACCTCGCTAACCTCTTCTTTTTTGGAACGTCATCCAGTGCTGTATCGTCTTCGTCGGTAACTTCGTCCCCTCTTCGGCGTTGGAGTTGA 1908 0.5136 MRKLCFNPKTPSFALARNSPSSPQSLFSCPTPPRLSLSEPSSFDEDSFLEETEALILKWNPDSSAYAKVTSLFYQDKTEAKHYINCVNQLQQTMHSLLSHNPSSHKLILAHNLMQIAMKRLKKEFYQILSMNRAHLDPESVSARSSRTSANSSSSDYEDDFAAEDDDIRAAGESISEVEQVSSSAMADLKLIADCMVSSGYAKECVSVYIIIRKSIIDEGIYRLGVEKLSSSRANKMDWEVLDLKIKSWLEAARISVRTLFNGERILCDHVFSYSDSVRESCFAEISRDGASLLFGFPELVSKTKKSSPEKLFRVLDMHAVASELLPEIESIFSSDYNSGVRSQILTSLQRLTESAQFLLGEFESTIQKDTSKSAVNGGGVHLLTVQTMNYLSVLADYINVLSDIFPRDWLPPPKSSSLPESYLYSPESDYSASTPALTARMAWLILVLLCKLDGKAKHCKDVSLSYLYLANNLWYVVARVRSSNLQYVLGDDWITKHEAKAKRFVANYEKVAWGEVVSSLPENPAAAEARAVFENFNLKFEEAYRQQNSFVVADRELRDQIKGSIARSIVPRYREWYNALLATVGSVRDLTVTEYVTFTPEDVENYLANLFFFGTSSSAVSSSSVTSSPLRRWS* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00456 635 MobiDBLite consensus disorder prediction 17 42 - -
Lapu6g00456 635 MobiDBLite consensus disorder prediction 140 160 - -
Lapu6g00456 635 SUPERFAMILY Cullin repeat-like 50 612 IPR016159 -
Lapu6g00456 635 Gene3D Exocyst complex component Exo70 65 619 - -
Lapu6g00456 635 Pfam Exo70 exocyst complex subunit 247 609 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu6g00456 635 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Lapu6g00456 635 MobiDBLite consensus disorder prediction 140 157 - -
Lapu6g00456 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 612 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00456 Lapu-Chr6 4758663 4760981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00456 49 612 EXO70 exocyst subunit family AT3G09520 54.609 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00456 K07195 - gmx:100810548 1083.17