Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00454 ATGCTGACACCTAAAGGAAGCAAGCAGGGTCATAGACATAGAAAACTACCGAGTTTTCCTTCTGATTCTGGTTCTTGCAGTGATGGGGTTGCAGATGAAGATTCAGGTTCATTTCAGTTGGGCTGGGGATCTTCAAAACAACCGTTTGGAACTCCCATGAAGAAGTTGTTAGCTGAAGAACTGTCCCGTGAAACTGAACCCAAAAGAAGGGCTCCCGGTGTCATAGGCAGATTAATGGGTCTTGATGGACTTCCGTTGCAATTGCCTTCTAATAAGCATCACAAGCATGTGTCAGAAAATAACATAAAAGGGACAACACCGGCTGTGAAAACTCGAAGCAGTGGTAAATTATATGGTGGCCGAACATCTAGAAGAAGTTCAAAGAATCAACAAGAGTTTAAGGATGTGTTTGAGGTCTCAGAGATCTCAAACATAGAGAGATGTAGGTATTCATCGCAGGGGTCTGTGAAGTTGAAGATCACTGATGATGAAATGTCATTTGTTGAACAGAAATTCATGGATGCCAAACTCCGTGCAACTTATCAGGATTTACAGTCTTCCCAGGATTCCCATGATACACTCGAGATTCTAGATTCTAACAATGATCTTTTGCAAAAATACTGTAAGCGGCCAGGTTCTTTGTTTAAAAGGAATCTAGATGATCTGCAACGTTCCCCTTCCGATTCACATTTTGCTCACATCGAAGGTACCAAATCATCAGATATACAGAATTATGAACATGGTGACTTAAGCCAGAAGACGGAAAGGGAGATGAAAGGGTTGAATTACAATAGATCTCATCAGAAGGATCAAGATGGTTATTCTTGCCATTTAGTCAGGAGACAGGATATTCATAGTTCGCCAAAATCATCAAAGCTTCAGTTTAAGGGAAAAAATGCGCCTGATGCAGTCCCAACAAGGATTGTTATCCTAAAACCTAATCTTGGAAAAGTGCAGAAAGATACCAAAATTGGTTCATCACCACGTTCTTCACATTCTTTTCTGTTAGAGTATAGAAAGTGTCCTGAATTTTCAGATAGCAGATTTAGGGACACTGAACTGAGACAAAGGAAAAATTTGCCGGATAATTCCTGGCATTCAAGGCAGAATTCTTTGGAATCAAGAGAAATTGCAAAGGAAATCACAAGCCAAATGAAAAATAGTTTGAGTAATAGCTCCATGTTATTATCATCTTCTGGATTTAGAGGAAATACTTGGGACGATAGCTCATGTAGTTTTTCTGGGAATGAATCTCATGCGGAATCAGAGGTGACACCTGCAGCTTTGGGAAAGTCATTTTACCTAAATAATACTATCAGCCCGTCATCCTGTTTTAGTGAATCATTTGTGAGTAAAGAAGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCTCTCAAGTCTCAGCAGGGCCGTTCTGTCTCCAGGACTGGCACTCTGGCTGAAATGCTTGCTGTCCCTGACAAGGAAATGAAAACAGCTAATTTTGACAGCAGCCCTGGTGGGGAAGGTTTACTTGATAAACTTCCTAGCAATAGTAAACCTGCTGGGTGGGTTGAACCATTGGGTATTAGCAGTAGGGATGGATGGAAGGATGGATGTATTGGAAGTTTACCAAGGTCTAAGTCCCTTCCTGCTTCCTCTACTACTGCCTTTGGAAGTCCTAGAACAATTTTGCGCTATGAAGCTCTTCACGATGATCGATTTATGATGCCAAAGGTAGCCTGTAAACGGGAAAGGAAGAAAGTAGTGAAATGTCTTGATCAGAGACAGTGTATGAATGCTAGAAACCTAAAAAGCAAGAAGTCTTGGTATTCTCATCCATCAAACCTAGAAGGCAATGAGTCATCCCCAGACATGAATACAATTCAAAATCAAGTGAGGATTAATCTTGAAGAGGATTTGCCGAAGCAAGAAATGTTAGCCGCCGCTGAATCAATGGCCGAGATCCTCAGAGAAACTATTGCAGTTGCTGAAGCTGCTGTGGATGTGGCAGACGAAAATGCAGTTGGTTCATCTGAATCTTATATTAAGGAGTTATCAGTTGGGTCTTCCAGTGAAAGTTCTGTCTCCTTGCAACCACCTGTATCTGGAGTTGAATCTTCATGCTGTAAAGATGCGGATCAACCCAGTCCAGTCTCAGTGCTAGAACCTTCTTTTACTGATGATCTGTCATCATGTTCCGAGTGTTTTGAAAGTCTCAGTGTTGACATACAAGGGCTCCGAATGCAACTTCAGTTGCTGAAGCTAGAATCTGAAGAATTTGTGGAAGGATCCGTGCTAATTCACAGTGATGGAGATGGTGGGGAAGCATATTCAGGAATTTCAGAAGACAATGGATTACTTAAGACTGGAGATAGCTGGGAGTCTTTCTACATGATTGATGTCTTGTCTGAATCTGGTATTGATAGAGCTCAGCCTGATGCATTTTTGGAAGTTTGGGATTCTCCTGAATGTCCTGTTAGTCTTTCGGTGTTTGATGAGCTTGAAAATAGGTACTCTGATTGGAGTACTTGCTCAAGGTCCGAAAGGAGATTGCTTTTTGATCGTATAAATTGGGGAATTATCAATATATACGAGCAATTCATTAACGCACAGTCATGGGTAATCCCTTCGAGAGCCACAAATCACTGTTCTAATTCTAAATTGATTAAAAACGGACTCCAAGACTGTCTGTACGGGATGCTTTGGAGCCAGGGAAAAGTAAAGGATACTGCACTGGGGAAGGTGTTGGTTAGCGAATTGCAGTGGTTGAACTTAAGAGATGACATTGATGGAATAGGTAGGGAAGTGGAGAGCTTGCTACTAGATGATCTAGTGACAGAGATAGTTATTACATAG 2841 0.4136 MLTPKGSKQGHRHRKLPSFPSDSGSCSDGVADEDSGSFQLGWGSSKQPFGTPMKKLLAEELSRETEPKRRAPGVIGRLMGLDGLPLQLPSNKHHKHVSENNIKGTTPAVKTRSSGKLYGGRTSRRSSKNQQEFKDVFEVSEISNIERCRYSSQGSVKLKITDDEMSFVEQKFMDAKLRATYQDLQSSQDSHDTLEILDSNNDLLQKYCKRPGSLFKRNLDDLQRSPSDSHFAHIEGTKSSDIQNYEHGDLSQKTEREMKGLNYNRSHQKDQDGYSCHLVRRQDIHSSPKSSKLQFKGKNAPDAVPTRIVILKPNLGKVQKDTKIGSSPRSSHSFLLEYRKCPEFSDSRFRDTELRQRKNLPDNSWHSRQNSLESREIAKEITSQMKNSLSNSSMLLSSSGFRGNTWDDSSCSFSGNESHAESEVTPAALGKSFYLNNTISPSSCFSESFVSKEAKKRLSERWKMSLKSQQGRSVSRTGTLAEMLAVPDKEMKTANFDSSPGGEGLLDKLPSNSKPAGWVEPLGISSRDGWKDGCIGSLPRSKSLPASSTTAFGSPRTILRYEALHDDRFMMPKVACKRERKKVVKCLDQRQCMNARNLKSKKSWYSHPSNLEGNESSPDMNTIQNQVRINLEEDLPKQEMLAAAESMAEILRETIAVAEAAVDVADENAVGSSESYIKELSVGSSSESSVSLQPPVSGVESSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLSVDIQGLRMQLQLLKLESEEFVEGSVLIHSDGDGGEAYSGISEDNGLLKTGDSWESFYMIDVLSESGIDRAQPDAFLEVWDSPECPVSLSVFDELENRYSDWSTCSRSERRLLFDRINWGIINIYEQFINAQSWVIPSRATNHCSNSKLIKNGLQDCLYGMLWSQGKVKDTALGKVLVSELQWLNLRDDIDGIGREVESLLLDDLVTEIVIT* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00454 946 MobiDBLite consensus disorder prediction 230 246 - -
Lapu6g00454 946 Coils Coil 641 668 - -
Lapu6g00454 946 PANTHER AFADIN 6 944 - -
Lapu6g00454 946 MobiDBLite consensus disorder prediction 57 71 - -
Lapu6g00454 946 MobiDBLite consensus disorder prediction 101 126 - -
Lapu6g00454 946 Pfam Domain of unknown function (DUF4378) 791 942 IPR025486 -
Lapu6g00454 946 Pfam DUF761-associated sequence motif 65 85 IPR032795 -
Lapu6g00454 946 MobiDBLite consensus disorder prediction 1 75 - -
Lapu6g00454 946 Pfam Protein of unknown function (DUF3741) 169 213 IPR022212 -
Lapu6g00454 946 MobiDBLite consensus disorder prediction 95 130 - -
Lapu6g00454 946 MobiDBLite consensus disorder prediction 226 246 - -
Lapu6g00454 946 MobiDBLite consensus disorder prediction 20 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00454 Lapu-Chr6 4725138 4731529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00454 48 945 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 33.873 2.21e-125 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00454 - - pvu:PHAVU_001G171300g 1564.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00454 6 4725138 4731529 Lapu7g00856 7 10258503 10264313 PCT