Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00447 ATGGCTTGTTATCAACAGAAACTGTTTAACAGACTGAAGCCATTCATAGGTGTAGTGTTCTTACAGTTTGGATATGCTGGTATGGATGTTCTATCCAAAGCTGCACTCAACAAGGGGATGAGTAACTATGTATTTGTTGTGTACCGTCATGTTTTTGCCTTTGTTGTCATGGCCCCTTTTGCAGTGTTCTTGGAGAAGAAAGTGAGGCCGAAGATGACGTTTTCAATCTTCATGAAGATAGTGATTCTCAGCTTGCTAGAGCCAGTTATTGACCAAAATTTATATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTCCTCCCTGCCATTACCTTTCTCATGGCTTGCATTCTTAGGCTTGAGAAGATAAAATTAAAAAGTATACGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCTACTGTTGCAGGTGCCATGATCATGACACTGATAAAGGGCCCAATACTTGATCTTTTTGGAACACACGGAAGCAATACAAACAACCTGCAAAATGGTGGGGTAAATCTTCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCCATTACCATTGAAGCCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGAACAGTTGAAGGTGGCATAGTGGCACTGGTTATGGAAAGGAATAATTTTTCAGCTTGGTCTCTGAAATGGGATACAAAATTGCTGGCTGCTGTCTATAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGCGGTGATGAAAGATAGAGGCCCGGTCTTTGTAACAACTTTTAACCCTCTCTGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTTTGGCAGAACAAATGTACCTTGGAAGGGCGGTTGGAGCTATTGTAATTATTTTAGGATTGTATCTTGTGGTGTGGGGTAAAAGCAAAGAATACGAGTCATCAAGTGCGATTACTGAAGAACATGTATTGCCAGCCAAGCAAACAGTAGAAAAGAGCAACGGCAAAGAGGAACATTCTAATTTTGAGGTCATCACTCTCAGTAACTTAGGCACAGGAAACATAGCACGAGATGAACAAGTATGA 1149 0.4178 MACYQQKLFNRLKPFIGVVFLQFGYAGMDVLSKAALNKGMSNYVFVVYRHVFAFVVMAPFAVFLEKKVRPKMTFSIFMKIVILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFLMACILRLEKIKLKSIRSQAKVVGTLATVAGAMIMTLIKGPILDLFGTHGSNTNNLQNGGVNLQHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGTVEGGIVALVMERNNFSAWSLKWDTKLLAAVYSGIVCSGMAYYIQGAVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEQMYLGRAVGAIVIILGLYLVVWGKSKEYESSSAITEEHVLPAKQTVEKSNGKEEHSNFEVITLSNLGTGNIARDEQV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00447 382 Pfam EamA-like transporter family 19 154 IPR000620 GO:0016020
Lapu6g00447 382 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Lapu6g00447 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Lapu6g00447 382 PANTHER WAT1-RELATED PROTEIN 13 336 IPR030184 GO:0016020|GO:0022857
Lapu6g00447 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00447 Lapu-Chr6 4620228 4623659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00447 5 372 Nodulin-like Gene Family AT2G37460 63.859 2.50e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00447 - - gmx:100777050 674.855