Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00443 ATGACATCATTCTTAAAGCCTGAGAATGCTCTCAAAAGGGCGGAAGAGTTAATCAATGTTGGGCAGAAGCAGGATGCTTTGCAGACTCTTCATGACCTCATTACCTCAAAGAGGTACAGAGCATGGCAGAAAACACTTGAAAGGATTATGTTCAAGTATGTTGAACTTTGTGTGGACATGCGCAAAGGACGGTTTGCAAAAGATGGGCTTATTCAGTATAGGATAATATGTCAGCAAGTCAATGTTAGTTCACTGGAGGAGGTGATCAAACATTTTATGCACCTGTCAACTGAGAAAGCTGAACAAGCTCGTAGTCAAGCGCAGGCATTAGAAGAAGCCCTTGACGTAGATGATCTAGAGGCTGATAAAAGGCCAGAGGACTTGATGTTGAGTTATGTCAGTGGTGAGAAAGGAAGGGACAGATCTGATCGAGAGCTTGTTACACCATGGTTTAAATTTCTTTGGGAAACTTATAGGACAGTGCTTGAGATATTGCGGAACAACTCAAAACTGGAAGCTTTATATGCTATGACAGCTCATCGAGCTTTCCAGTTCTGTAAGCAATACAAAAGAACAACTGAGTTCCGCAGACTGTGTGAAATCATACGAAACCATTTGGCTAATCTCAATAAGTACCGTGACCAACGAGACAGGCCTGACCTTTCAGCTCCTGAAAGCTTACAACTGTATCTTGATACTAGAGTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTCAGATCAGTGGAAGATATACATGGACTGATGTGCTTGGTCAAGAAAACGCCCAAGCCATCTTTGATGGTTGTTTACTATGTGAAGCTGACAGAAATATTTTGGATATCATCAAGTCACCTGTATCATGCATATGCATGGTTCAGGCTCTTTTTGTTGCAGAAAAGCTTCAATAAGAATCTTAGTCAGAAGGATTTGCAATTAATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCTCATGACCGAACACATGGTGCGTCTCATTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGGATGGCCAATCTCATTGGCTTTAATCTTGAAACTAAACCTGAAAGCAGAGAAATGCTGTCAAGATCATCACTTCTTGCTGAACTGGCGTCCAAGGGAGTGATGTCTTGTGTAACTCAGGAAGTGAAAGATATTTACCATCTTTTGGAACATGAATTTCATCCCTCAGATCTTGCATTAAAAGCGCTTCCCTTGATAACTAAAATCTCAAAGTTAGGGGGCAAGCTTTCTACTGCTTCTTCTGTTCCAGAAGTACAACTGTCTCAATATGTCCCCTCACTGGAAAGACTAGCTACCATGAGGTTGCTGCAGCAGGTGTCCAATGTGTACCAGACAATGAAGATTGAGACTTTATCTGGGATGATCCCGTTCTTTGACTTTTCTGTAGTGGAAAAGATTTCTGTAGATGCTGTAAAGCAGAAGTTTGTATCCATGAAAGTTGATCACATGAAGAATGTTGTGATCTTTTGCAAAACGAGTCTCGAGTCTGATGGCTTAAGGGATCACTTGGCTAATTTTGCTGAACAATTAAATAAGGCCAGACAAATGATTTATCCCGCTGATAGGAAACAATCTAAACTTGGAGCTTTACTTCCAACTTTGACAGAGGTTGTTGCCAAAGAGCACAAGAGGCTTCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGGGAGGAGGAGTCAAAGAGACTAAGACTTCAGAAAATAACTGAAGAAGCAGAACAAAGACGGCTGGCCACTGAGTACGAGCAGAGGAAGAATCAGAGGATCCTCAGGGAGATAGAAGAAAGAGAAATTGAAGAAGCTCAAGCTTTACTCCAGGAAGCTGAAAAGCGTATTAAGAAGAAGGGGAAAAAGCCAATCATAGAGGGAGACAAAATGACCAAGCAGACCTTGATGGAGCTAACTTTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAATTGCAGAAGTTAGCTAAAACCATGGATTATTTGGAGAGAGCAAAAAGAGAAGAGGCTGCTCCAATGATTGAAGCTGCTTATCAACAGCGTTTAGTTGAGGAGAGACTACTTCATGAGCGTGAACAACAGCAAGAGGTTGAAGTGAGCAAACAGAGGCATGAGGGAGATCTCAAGGAGAAGGAGAGGCTTGCACGAATGATGGGCAATAAGGAGATATATCAGGTCCGAGTTGTTAGTCACCGCCAAGCAGAGTTTAATAGATTGAGAAGAGAACGGGAAGAGCGGATCTCTAGGATTTTGCAGTCCAGGAGACAGGAGAGGGAAAAAATGAGGAAGTTGAAGTATTATCTCAAATTGGAAGAAGAGAGGCAACAAAAATTGCGTGAGGAGGAGGAAGCTCGGAAACATGAAGAGGCTGAAAGGAGAAAGAAGGAAGAGGCTGAACGCTTAGCAAAACTGGCCGAGATAGCTGAAAAGCAGAGGCAGAGAGAGCGGGAACTCGAGGAAAAGGAGAGACAAAGGAGAGAAGCCTTGTTAGGCAGAGCTGCTGAACCAGCTCCTCCTGCTCGACCGTTGGAATCTGGAACAGCTGCTCCTGCTGCAGCTGCTGCTGCTGCAGCCGCTGCAGCTCCAACCCCTGGGAAATATGTCCCGAAGTTCATGCGAGACAGAGCTGAAAGAACAGGAACTGCTCCTTCTCCGGAAACAGATCGCTGGGGTAACAGTGGTAGCAGCAGGCCGGATGGTGACAGGTGGCGTGGTGGTGATGATAGGAGAACTAGTTATGGTGCCGGTGGAGGTTCAAGGTCATCATCTACCTGGTCCAGGAATCCCCGTTGA 2880 0.4403 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGRDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRVEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDIYHLLEHEFHPSDLALKALPLITKISKLGGKLSTASSVPEVQLSQYVPSLERLATMRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNVVIFCKTSLESDGLRDHLANFAEQLNKARQMIYPADRKQSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREIEEAQALLQEAEKRIKKKGKKPIIEGDKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPMIEAAYQQRLVEERLLHEREQQQEVEVSKQRHEGDLKEKERLARMMGNKEIYQVRVVSHRQAEFNRLRREREERISRILQSRRQEREKMRKLKYYLKLEEERQQKLREEEEARKHEEAERRKKEEAERLAKLAEIAEKQRQRERELEEKERQRREALLGRAAEPAPPARPLESGTAAPAAAAAAAAAAAPTPGKYVPKFMRDRAERTGTAPSPETDRWGNSGSSRPDGDRWRGGDDRRTSYGAGGGSRSSSTWSRNPR* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00443 959 MobiDBLite consensus disorder prediction 944 959 - -
Lapu6g00443 959 Coils Coil 615 649 - -
Lapu6g00443 959 Gene3D - 269 342 - -
Lapu6g00443 959 Gene3D - 352 510 - -
Lapu6g00443 959 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 933 IPR027512 GO:0005852
Lapu6g00443 959 Gene3D UVR domain 217 268 - -
Lapu6g00443 959 MobiDBLite consensus disorder prediction 803 859 - -
Lapu6g00443 959 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Lapu6g00443 959 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lapu6g00443 959 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Lapu6g00443 959 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Lapu6g00443 959 Coils Coil 796 856 - -
Lapu6g00443 959 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 940 IPR027512 GO:0005852
Lapu6g00443 959 Coils Coil 561 602 - -
Lapu6g00443 959 Coils Coil 667 697 - -
Lapu6g00443 959 Coils Coil 93 120 - -
Lapu6g00443 959 MobiDBLite consensus disorder prediction 803 959 - -
Lapu6g00443 959 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Lapu6g00443 959 Pfam PCI domain 373 508 IPR000717 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00443 1 945 Eukaryotic Initiation Factors Gene Family AT4G11420 72.330 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00443 K03254 - gmx:100803796 1438.71