Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00438 ATGCCGTTGAACATAACCTCCATCAAGACATCCTCTAATGGAGTGTGGCAAGGTGATAATCCTTTAGACTATGCCTTCCCACTTCTAATAGTTCAAATCACCTTAGTCCTCATCGTCACTCGCTCCCTCGCTTTAATTCTCAAACCTCTACGACAACCCAAAGTCATTGCTGAGATTCTGGGTGGAGTTTTGCTGGGCCCATCAGTAGTGGGAAGAAACAAAAGTTATTTGCACCGAATATTCCCTTCATGGAGCACACCCACTCTGGAATCTGTAGCAAGCATAGGTCTTCTGTTTTTCCTATTCCTCGTAGGTTTGGAGCTCGATCTCAATTCCATTCGCCGGAGCGGCCGAAGAGCCTTCAGCATCGCCGCCGTCGGGATCTCTCTTCCTTTCGTCAGCGGCATAGGCGTTGCCGTCGTCCTCCGCAAAACAGTGGACGGTGCAGACGAGCCCGGCTTCGCGCAGTTCGTCGTCTTCATGGGCGTGGCGCTTTCCATCACCGCATTCCCGGTGCTGGCGCGTATCCTGGCGGAGCTGAAGCTCCTCACGACGCGCGTGGGGGAGACCGCGATGGCGGCGGCGGCGTTCAATGACGTAGTCGCGTGGATCCTACTTGCGCTGGCAGTGGCTCTGGCGGGGAACGGCAGCGGGTCCGGAAAGAGTCCTCTGGTGTCGGTGTGGGTTCTCCTCTCGGGGCTGGCGTTTGTGGTTGTGATGATGGTGGCTATCCGACCGGTGATGGAGGTTGTGGCGAGGAGGGGCGAAAACGACGCGGGTGACGAGGTTTATGTTTGTTTGACGCTGGCGGGGGTGTTGGTGTCGGGGTTTGTGACGGACCTGATCGGGATTCACTCAATATTCGGGGCGTTCGTGTTCGGGTTAACGATTCCGAAGGAGGGTAACTTCGCGAAGAAGCTAACAGAGAGGATCGAGGATTTTGTTTTAGGTTTGTTGCTGCCTCTCTACTTTGCCTCAAGCGGGTTGAAAACCGACGTAACTACCATACGTGGCGCTTCCGCGTGGGGGCTTCTGGTTCTGGTCATAGCCACGGCTTGCGCTGGGAAAATTCTTGGCACCTTCGCTGTCGCCATGTTCTGCATGATCCCCGCCAGGGAATCGCTCACACTTGGCGTCCTCATGAACACCAAAGGCCTCGTTGAGCTCATCGTACTCAACATTGGAAAGGAGAAAAAGGTTTTAAATGATGAAATGTTTGCAATTTTAGTTCTTATGGCTCTATTCACTACCTTCATCACAACACCAATAGTGATGGCCATATACAAACCAGCTCGAGGAAACTCAATGAAAGCCCGGCGAAAACTAGGTGACATTTCCTGGGGGTCCCGGGATGAAATGGTTGAGAAGTTCAGAGTCTTGGCCTGTTTCCATGGCCCACTCAACATCCCTTCAATCATAAATTTGATTGAATCAACTCGAAGCACCAAGAAGTCCATCATAAAGTTGTTCATGATGCACCTTGTTGAGCTCACAGAGCGCTCATCCTCCATCATCATGGTTCATCGTGCTCGAAGGAATGGTTTCCCTTTCTTCAACCGCTCGCGTCGTGACGAGTGGCATGATCGACTTGCAGGAGCCTTTCAAGCCTACAGTCAACTAGGCCGAGTCATGGTTCGATCCACAACCACTGTCTCTTCTCTCTCCACCATGCACGAGGACATCTGCCACGTTGCAGAGGAGAAAATGGTGACCATGATTGTTTTGCCCTTTCACAAACAGTGGAGGACAGAAGTGAATGCGGACAACGAGAAACATCAAGTGTTAGAAAATGCAGGCCACGAATGGAGAGTGATGAACCAAAAGGTACTTAAGAATGCACCTTGCTCAGTGATCGTGCTTGTGGATCGTGGATATGGTAATTTGTCTCAAACTCCAACCCCGAATTCCATTGCCGCCCAACGAGTCTGCATCATCTTCTTCGGTGGCCCGGATGATCGTGAGGCTCTAGAGTTGGGGAAGAAGATGCTTGAACACCCGACAGTTAAAGTAAGTGTTGTAAGGTTTGTTGAAAAGCATGGCTTGGATGGGAATAACATTGTGTTAAGCTTCTCACCTGTCAAAAACAATGACGAAAGTTACAGCTTCTCCACTGCTAAAATGAATCGCCAGCAAGAAAAGGAGTTGGATGAGGAGGCAATTAAAGAGTTTCAAAGCAAGTTGAATGACATGGTGGAATATATTGAGAAGTTTAGTGAGGACATTGTGGAAGACGTATTAATAATAGGAAAAAGTGGAGATTATGATCTCATAATTGTTGGAAAGGGTCGATTCCCATCGAATATGGTGGCTGGATTGGCAGAAAGGAAACCGGAACATGCCGAGTTAGGTCCTATAGGAGATGTTTTATCTTCATCAGAACATGAGGTGTTGTCATCTGTATTGGTTATTCAACAACATGATGTGACATTGGTAGATGATGCTCCTGTATGCAAGGTGCATGATGAGTATGCCATGACCAACAATGATGATTCATCTCGTGGAGTTGGAATTTCAATTGCCAATGACAATGCAGTGTAA 2538 0.4921 MPLNITSIKTSSNGVWQGDNPLDYAFPLLIVQITLVLIVTRSLALILKPLRQPKVIAEILGGVLLGPSVVGRNKSYLHRIFPSWSTPTLESVASIGLLFFLFLVGLELDLNSIRRSGRRAFSIAAVGISLPFVSGIGVAVVLRKTVDGADEPGFAQFVVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVVAWILLALAVALAGNGSGSGKSPLVSVWVLLSGLAFVVVMMVAIRPVMEVVARRGENDAGDEVYVCLTLAGVLVSGFVTDLIGIHSIFGAFVFGLTIPKEGNFAKKLTERIEDFVLGLLLPLYFASSGLKTDVTTIRGASAWGLLVLVIATACAGKILGTFAVAMFCMIPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVMAIYKPARGNSMKARRKLGDISWGSRDEMVEKFRVLACFHGPLNIPSIINLIESTRSTKKSIIKLFMMHLVELTERSSSIIMVHRARRNGFPFFNRSRRDEWHDRLAGAFQAYSQLGRVMVRSTTTVSSLSTMHEDICHVAEEKMVTMIVLPFHKQWRTEVNADNEKHQVLENAGHEWRVMNQKVLKNAPCSVIVLVDRGYGNLSQTPTPNSIAAQRVCIIFFGGPDDREALELGKKMLEHPTVKVSVVRFVEKHGLDGNNIVLSFSPVKNNDESYSFSTAKMNRQQEKELDEEAIKEFQSKLNDMVEYIEKFSEDIVEDVLIIGKSGDYDLIIVGKGRFPSNMVAGLAERKPEHAELGPIGDVLSSSEHEVLSSVLVIQQHDVTLVDDAPVCKVHDEYAMTNNDDSSRGVGISIANDNAV* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00438 845 Gene3D - 28 435 IPR038770 -
Lapu6g00438 845 Gene3D - 488 782 - -
Lapu6g00438 845 FunFam Cation/H(+) antiporter 15 28 434 - -
Lapu6g00438 845 PANTHER CATION/H + ANTIPORTER 8 807 - -
Lapu6g00438 845 Pfam Sodium/hydrogen exchanger family 36 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00438 Lapu-Chr6 4509063 4514476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00438 75 832 Antiporter Super Family AT3G53720 64.554 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00438 K26731 - gmx:100798644 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00438 6 4509063 4514476 Lapu6g00438 6 4509063 4514476 ECH