Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00430 ATGGCACGTAGAAACTATACCACCCAAATAACAGCACTTGTTGTAGATGACAATGTACTGAACCGAAGGATTCACCAAAAGCTGTTGGAGAGAGTTGGAGTGAGAAATCAGGAGGGAGTGGAAAATGGGAAAGAAGCAGTGGACATTCATTGCCATGGACGAAGATTTGACCTCATTCTCATGGACATGGACATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGTTCAATGGGCATTGGGAGCATGATTGTTGGTGTGTCATCACGTTGTACAGAGACAGAAATACGAAAATTTATGGAATCGGGGTTGAATGACTACCATGAGAAACCCTTGAACACTGCTAAGCTTAATTCTATTCTTGATAAGATGAACCCTAGTTTTACTAGTAAATAA 402 0.4129 MARRNYTTQITALVVDDNVLNRRIHQKLLERVGVRNQEGVENGKEAVDIHCHGRRFDLILMDMDMPIMNGIEATKELRSMGIGSMIVGVSSRCTETEIRKFMESGLNDYHEKPLNTAKLNSILDKMNPSFTSK* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00430 133 SUPERFAMILY CheY-like 9 126 IPR011006 -
Lapu6g00430 133 SMART REC_2 10 123 IPR001789 GO:0000160
Lapu6g00430 133 CDD REC_hyHK_CKI1_RcsC-like 13 123 - -
Lapu6g00430 133 Pfam Response regulator receiver domain 13 123 IPR001789 GO:0000160
Lapu6g00430 133 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 127 - -
Lapu6g00430 133 ProSiteProfiles Response regulatory domain profile. 11 127 IPR001789 GO:0000160
Lapu6g00430 133 Gene3D - 5 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00430 Lapu-Chr6 4403703 4404267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00430 10 123 Response Regulator Gene Family AT3G04280 48.276 2.49e-28 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu6g00430 Response_reg 7e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00430 - - gmx:100794931 216.083