Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00413 AAAGACGTGCATGTTATGGAAGATGAAGGCAAAGAGAAAGACAAACACGTAACAAAATCTGACAGCTCGCACACCCAATTAAAAGTACTTGTTGTAGATGACGTTAAGCTTATTCGAATGAGACATAAAATGCTGTTGGACAGAGTTGGGGTAAAAGATCACGTTGCAGTGGAAAATGGCAAAGAAGCAGTTGAACTTCATAACTGTGGTCAAAGTTTTGACCTGATTCTCATGGATAAGGACATGCCTGTCATGAATGGAATTGAGGCAACAAGAACACTTCGTTCAATGGGCATTAGATGCAAGATCATTGGTGTGTCGTCATCAATCTGCAATCGGCGATATGTACAAGAATTTGTTGAAGCAGGGCTAGACGACTTCTACACGAAACCCTTGACTGTTAAAATGCTTGTCGAAATTCTTGACAAGGTCATG 435 0.4069 KDVHVMEDEGKEKDKHVTKSDSSHTQLKVLVVDDVKLIRMRHKMLLDRVGVKDHVAVENGKEAVELHNCGQSFDLILMDKDMPVMNGIEATRTLRSMGIRCKIIGVSSSICNRRYVQEFVEAGLDDFYTKPLTVKMLVEILDKVM 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00413 145 MobiDBLite consensus disorder prediction 1 21 - -
Lapu6g00413 145 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 145 - -
Lapu6g00413 145 Pfam Response regulator receiver domain 29 141 IPR001789 GO:0000160
Lapu6g00413 145 CDD REC_hyHK_CKI1_RcsC-like 29 141 - -
Lapu6g00413 145 SMART REC_2 27 141 IPR001789 GO:0000160
Lapu6g00413 145 ProSiteProfiles Response regulatory domain profile. 28 145 IPR001789 GO:0000160
Lapu6g00413 145 Gene3D - 4 145 - -
Lapu6g00413 145 SUPERFAMILY CheY-like 26 145 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00413 Lapu-Chr6 4139410 4140014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00413 27 133 Response Regulator Gene Family AT3G04280 44.444 8.80e-22 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu6g00413 Response_reg 8.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00413 - - var:108322984 150.984