Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00405 ATGAGACGGCGCCCCGTGGCGGGCATTCTCCCTGACCAGATGGAGAAAACCTCCTCCAGGAACCCTAATTCCCGCCTCTGCTTCCTCGCGTCACTCTCCGCATTCTTCTGGTTCCTCCTCCTCTACTTCCATTTCGCCGTTCTCGGAAACCAATCCCCCAAACTAACCCCTATCCCAGTCACCTTTCAACAACCTCGCAAAAGCCTAGCCTCCCAGACTCAAACCCTAACCCTAACCGATACCCCTCCGCCACCATCCTTCCCCTTCGCACCTGCCCTCCGCACTGCCCTCAACAAGACCGACAGGTGCGGAGGACGCTACATCTACGTCCATGACCTCCCCTCGCGCTTCAATGTGGACATGTTGAAGAAGTGTAGAACGCTTTCTCTTTGGACCAACATGTGCAAGTTCACCACCAACGCTGGCCTCGGCCCCCCATTGGAAAACGTTAACGGCGTCTTCTCTGACACCGGCTGGTACGCTACCAATCAGTTCGCCGTTGACAGGCCCGAGTGGAAGATCATGAACGGGAGGGACCACTTTCTCGTGGCTGGGAGGATCACGTGGGATTTTAGAAGACTCACTGAGGACGAATCGGATTGGGGGAACAAGCTTTTGTTTCTGCCTGCGGCGCGGAACATGTCCATGCTTGTGGTGGAGTCTAGTCCCTGGAATGCGAATGATTTTGGGATTCCTTATCCCACTTATTTCCACCCTGCTAAGGATGATGATGTGTTCATTTGGCAGGAGAGGATGCGGAGGTTGGAGAGGAAGTGGTTGTTTTCTTTCGCCGGGGCTCCGCGCCCGGATAACCCGAAATCGATTCGGGGCCAGATTATTGAGCAGTGCAGGAGATCCGAGGTGGGGAAGTTGTTGGAGTGTGATTTTGGGGAGAGCAAGTGTCATTCCCCCAGCAGCATAATGCAGATGTTTCAAGGGTCACTTTTCTGCCTTCAGCCTCAAGGGGATTCCTATACCCGAAGATCTGCTTTCGATTCAATGCTAGCTGGGTGTATACCTGTGTTTTTTCATCCGGGTTCGGCTTACACACAATACACTTGGCATCTTCCTAAGAATTATACTAAGTACTCGGTGTTCATTCCGGAGGACGATATTCGAAAGAGGAATGTTAGTATAGAAGAGAGGCTTAGACAGATTCCCGAGGATGAAGTGAGGATCATGAGGGAGGAGGTCATTAGTTTGATTCCTAGATTGGTGTACGCGGATCCTCGATCCAAACTTGAGACTCTTAAGGATGCGTTTGATGTTTCGGTGCAGGCTGTGATTGACAAGGTTACCAATTTGAGGAAGGACATCATGGAAGGTCGCACTGATGATAATTTCATTGAAGAGAATAGTTGGAAGTATGCGTTGTTGGATGAGGGACAGCGCGAGGTTGGACCTCATGAATGGGATCCCTTCTTTTCTAAACCCAAGGATGGAAATGCGGATTCCATTCAGCTACACCCTCATGGCACAACCAGCTCTGCCTTCACCTCCAAGCTCAAATGGCACCTTTCATTCCTTCAACAAACCCTTTCCTCCGATGAGGACCCTTCTTCGCGCCTTCTCTACTCTTACCGTTCCGCCATGGACGGTTTTGCAGCTCAGTTTACTGAGTCTGAGCTTGAGTACCTCAAAAACTTGCCAGATGTTGTCTCAATTAGGCCTGACAGGATGCTCCAGATTCAGACCACTTATTCTTACAAGTTCTTGGGACTGAACCCTGCTAGAGAAAATGGTTGGTATCAATCCGGTTTCGGCCGTGGAACCATAATTGGGGTGCTTGATACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGATCAAGGAATGCCCCCAGTTCCCAAGAAATGGAAGGGTATATGCCAAGCTGGGAAGGCCTTTAACTCTTCCAATTGTAACAGGAAACTTATTGGTGCAAGGTACTTCACCAAAGGCCATTCTTCAGTATCACCTTTTAGAATTCCGGAATATCTCTCTCCAAGAGACTCCTCTGGACATGGCACACACACTTCATCCACTGCTGGAGGAGTGCCTGTGCCTTTGGCGAGTGTGTTTGTGTGTTGGTTCAATGGCTGCTATAACTCAGACATCATGGCTGCAATGGATGTGGCAATCAGAGATGGGGTGGACATTCTCTCCTTGTCTCTAGGTGGCTTCTCTACGCCTCTATATGATGATAGCATTGCCATTGGAAGCTTTAGAGCAATGGAGCATGGGATTTCGGTTATATGTGCAGCAGGAAACAATGGTCCTACGGCAATGTCTGTTGCGAATGAGGCTCCCTGGATTGCCACCATCGGTGCAAGCACACTAGACAGGAAATTCCCAGCTATAGTTCGCATGGGAAATGGACAAATGCTCTATGGAGAGTCCATGTACCCACTGAACCATCCAATGAGCAATGGAAAAGAACTTGAGTTGGTTTATCTGTCTGAAGGGGACACCGAGAGTCAGTTTTGCCTCAGAGGCTCTCTTCCAAGGGACAAAGTTAAAGGCAAAATGGTGGTCTGCGACCGAGGCGTCAACGGAAGAGCAGAAAAGGGACAGGTGGTGAAGGAGGCTGGTGGTGTTGCTATGATCCTCACCAACACGGAGATAAACTTGGGAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGATTGGTTTTGATGAAGCAGTTACCTTGAAAGATTACATAAACTCCACAACAATGCCCCTTGCTAGGATTGAATTTGGAGGAACTGTAATAGGGAAGTCTAGAGCTCCAGCAGTGGCAAGATTTTCAGCTAGAGGACCAAGTTATACAAACCCTTCAATCCTCAAACCAGATGTTATAGCTCCAGGAGTGAACATCATTGCTGCATGGCCTCAGAACCTTGGTCCTACTGGACTTCCAGAGGATTCTAGAAGAGTTAACTTCTCTGTCATGTCTGGTACCTCAATGGCATGCCCTCATGTTAGTGGAATTGCTGCTCTCATTCGCTCGGCTCACCCGAGTTGGAGCCCTGCAGCCATCAAATCTGCAATCATGACAACGGCCGAGGTAACCGACCACACTGGAAGGCCAATACTTGATGAAAACCAACCAGCAGGAGTTTTTGACATGGGAGCTGGACATGTGAATCCACAAAGAGCATTGAACCCTGGACTTGTGTATGACATTAGGCCAGATGACTATATCATCCACCTATGCAGCCTTGGATACACAAGGTCAGAAATATTCAGCATCACACACAGAAATGTGAGTTGCCATGCAGTCATGAAGATGAATAGAGGCTTCAGCCTTAACTATCCTTCATTCTCAGTGATTTTTAAGGATGGCGAGAGGCGAAAGATGTTCAGCCGGAGACTAACAAATGTGGGAAGTGCTAACTCCATCTACTCAGTGGAGTTCATGGCACCTGAAGGAGTAAAAGTGATAGTAAAACCCAAGCGACTTGTATTTAAACAAGCGAATCAAAGCTTGAGTTACAGGGTATGGTTTATATCGAGAAAAAGGGTTAAAAGAGGTGATGGTTTGGTGACCTATGCAGAAGGGAATTTGACATGGGTACACTCACAAAATGGTTCCTACAGGGTTAGAAGCCCCGTGGCAGTGACTTGGAAATCAAAGTAG 3609 0.4855 MRRRPVAGILPDQMEKTSSRNPNSRLCFLASLSAFFWFLLLYFHFAVLGNQSPKLTPIPVTFQQPRKSLASQTQTLTLTDTPPPPSFPFAPALRTALNKTDRCGGRYIYVHDLPSRFNVDMLKKCRTLSLWTNMCKFTTNAGLGPPLENVNGVFSDTGWYATNQFAVDRPEWKIMNGRDHFLVAGRITWDFRRLTEDESDWGNKLLFLPAARNMSMLVVESSPWNANDFGIPYPTYFHPAKDDDVFIWQERMRRLERKWLFSFAGAPRPDNPKSIRGQIIEQCRRSEVGKLLECDFGESKCHSPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNVSIEERLRQIPEDEVRIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAVIDKVTNLRKDIMEGRTDDNFIEENSWKYALLDEGQREVGPHEWDPFFSKPKDGNADSIQLHPHGTTSSAFTSKLKWHLSFLQQTLSSDEDPSSRLLYSYRSAMDGFAAQFTESELEYLKNLPDVVSIRPDRMLQIQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPVPKKWKGICQAGKAFNSSNCNRKLIGARYFTKGHSSVSPFRIPEYLSPRDSSGHGTHTSSTAGGVPVPLASVFVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGFSTPLYDDSIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTLDRKFPAIVRMGNGQMLYGESMYPLNHPMSNGKELELVYLSEGDTESQFCLRGSLPRDKVKGKMVVCDRGVNGRAEKGQVVKEAGGVAMILTNTEINLGEDSVDVHVLPATLIGFDEAVTLKDYINSTTMPLARIEFGGTVIGKSRAPAVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMACPHVSGIAALIRSAHPSWSPAAIKSAIMTTAEVTDHTGRPILDENQPAGVFDMGAGHVNPQRALNPGLVYDIRPDDYIIHLCSLGYTRSEIFSITHRNVSCHAVMKMNRGFSLNYPSFSVIFKDGERRKMFSRRLTNVGSANSIYSVEFMAPEGVKVIVKPKRLVFKQANQSLSYRVWFISRKRVKRGDGLVTYAEGNLTWVHSQNGSYRVRSPVAVTWKSK* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00405 1202 Pfam PA domain 808 891 IPR003137 -
Lapu6g00405 1202 ProSitePatterns Serine proteases, subtilase family, serine active site. 976 986 IPR023828 -
Lapu6g00405 1202 CDD Peptidases_S8_3 561 1011 IPR034197 -
Lapu6g00405 1202 SUPERFAMILY Subtilisin-like 564 1048 IPR036852 GO:0004252|GO:0006508
Lapu6g00405 1202 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 517 1197 IPR045051 -
Lapu6g00405 1202 Pfam Peptidase inhibitor I9 487 563 IPR010259 -
Lapu6g00405 1202 Pfam Fibronectin type-III domain 1093 1197 IPR041469 -
Lapu6g00405 1202 Pfam Exostosin family 168 382 IPR040911 -
Lapu6g00405 1202 ProSiteProfiles Serine proteases, subtilase domain profile. 566 1044 - -
Lapu6g00405 1202 MobiDBLite consensus disorder prediction 1 21 - -
Lapu6g00405 1202 Gene3D - 774 914 - -
Lapu6g00405 1202 PRINTS Subtilisin serine protease family (S8) signature 664 677 IPR015500 -
Lapu6g00405 1202 PRINTS Subtilisin serine protease family (S8) signature 975 991 IPR015500 -
Lapu6g00405 1202 PRINTS Subtilisin serine protease family (S8) signature 588 607 IPR015500 -
Lapu6g00405 1202 SUPERFAMILY PA domain 790 897 IPR046450 -
Lapu6g00405 1202 Gene3D Peptidase S8/S53 domain 590 1057 IPR036852 GO:0004252|GO:0006508
Lapu6g00405 1202 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 485 564 IPR037045 -
Lapu6g00405 1202 Gene3D - 1061 1199 - -
Lapu6g00405 1202 FunFam subtilisin-like protease SBT1.5 774 914 - -
Lapu6g00405 1202 CDD PA_subtilisin_like 781 907 - -
Lapu6g00405 1202 Pfam Subtilase family 588 1026 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00405 Lapu-Chr6 4035587 4046686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00405 486 1201 Subtilisin-like Serine Gene Family AT1G04110 65.684 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00405 - - pvu:PHAVU_001G165300g 2327.36