Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00365 ATGGCAAAGGAGCAAATTCAAGTGCTAAATGCGCTTGATGTGGCAAAAACACAATGGTATCATTTCACTGCAATCATCATCGCTGGAATGGGCTTCTTCACCGATGCATACGATCTATTCTGTATATCCCTTGTTACAAAGTTGCTCGGCCGCATATACTACCATGTTGATGGTGCACCAAAGCCCGGTACATTGCCTCCCAACGTTTCAGCTGCTGTAAATGGTGTGGCTTTCTGTGGAACACTTTCTGGTCAGCTTTTCTTTGGCTGGCTTGGTGATAAGATGGGAAGGAAAAGAGTCTATGGTATGACTCTGATGCTGATGGTAATATGTTCCATCGGTTCCGGCCTTTCATTCGGTCATAGTGCAAAATCTGTAATGGCAACTCTTTGTTTCTTCCGGTTCTGGCTTGGATTTGGTATTGGTGGAGACTATCCACTTTCTGCCACCATAATGTCTGAGTATTCTAACAAGAAGACTCGCGGTGCCTTCATTGCTGCAGTGTTTGCCATGCAGGGTTTTGGCATTTTGGGAGGTGGTATATTCGCAATTATAATTTCAGCTGCATTCAAGAACTGGTTTGATGCTCCACCATATGAGGTTGATCCAGCTGGCTCAACAGTTCTACAAGCAGACTACATTTGGAGGATAATTGTGATGGTGGGAGCACTCCCAGCGGCATTGACTTACTACTGGCGGATGAAGATGCCGGAAACTGCCCGTTATACTGCTCTAGTAGCCAAGAACGCGAAGCAGGCAGCAGCAGATATGTCTAAGGTTCTTCAGGTTGAGATTCAAGCTGAACCACAGAATGAAGAGTCAGCAAAGGCCAAGTCATATGGCTTGTTCTCAAAGGAGTTCCTCACTCGCCATGGACTGCATCTGCTTGGTACATCAAGCACATGGTTCTTGCTTGATATTGCGTTTTATAGTCAAAATCTTTTCCAGAAGGATATCTTCAGTGCAATTGGTTGGATACCTCCCGCCAAAACCATGAATGCTATTGAGGAGGTTTACAGAATTGCAAGGGCTCAAACACTCATTGCTCTGTGCAGTACAGTTCCTGGCTACTGGTTCACGGTGGCTTTAATTGACAAGATAGGAAGATTTGCTATCCAATTGATGGGGTTCTTCTTTATGACTGTGTTCATGTTTGCTCTTGCCATCCCTTACGACCACTGGACTCATAAGGATAACCGGATAGGATTTGTGGTGATGTATTCATTGACCTTCTTCTTTGCAAATTTTGGGCCTAATGCCACCACATTTGTGGTGCCAGCAGAGATTTTCCCTGCTAGATTCCGAAGTACTTGCCATGGAATTTCTTCAGCATCCGGGAAGCTTGGGGCTATAGTTGGTGCATTTGGGTTCTTGTACTTGGCACAAAACAAGGACAAAAGCAAAGCTGATGCAGGGTACCCTGCAGGTATTGGTATAAAGAATGCACTTATCGTCTTAGGTGTAGTTAACATTTTAGGCTTCTTCTTTACTTTCTTGGTTCCTGAGGCAAAGGGAAGATCGTTGGAAGAGATGTCAGGTGAAAATGATGAGGATGTTGGAACCGGGGAAGAGTCAGAGCAATCACATTCTCACAACAACAACAACAAAACTGTTCCGTATGTTTAG 1626 0.4459 MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSIGSGLSFGHSAKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIISAAFKNWFDAPPYEVDPAGSTVLQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEIQAEPQNEESAKAKSYGLFSKEFLTRHGLHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYRIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGIKNALIVLGVVNILGFFFTFLVPEAKGRSLEEMSGENDEDVGTGEESEQSHSHNNNNKTVPYV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00365 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 503 - -
Lapu6g00365 541 Pfam Sugar (and other) transporter 26 512 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu6g00365 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Lapu6g00365 541 NCBIfam phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016020
Lapu6g00365 541 CDD MFS_PhT 25 504 - -
Lapu6g00365 541 MobiDBLite consensus disorder prediction 526 541 - -
Lapu6g00365 541 SUPERFAMILY MFS general substrate transporter 12 512 IPR036259 -
Lapu6g00365 541 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Lapu6g00365 541 FunFam Inorganic phosphate transporter 1-6 20 527 - -
Lapu6g00365 541 MobiDBLite consensus disorder prediction 509 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00365 Lapu-Chr6 3601576 3604834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00365 1 518 Inorganic Solute Cotransporters AT3G54700 84.363 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00365 K08176 - gmx:100819445 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00365 6 3601576 3604834 Lapu6g00365 6 3601576 3604834 ECH
Lapu7g00759 7 8992263 8993905 Lapu6g00365 6 3601576 3604834 PCT