Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00361 ATGGAGGGAGGGAGAGGAGTTGTGAATGGAAACGCTTCAAACGCGGAGGTTAGGTACAGAGGGATTCGTAAGAGGCCATGGGGAAAGTTTGCAGCAGAGATTCGTGACCCTACAAGAAAAGGGGCTCGAATATGGCTTGGAACATTTGACACTGCTGAACAAGCTGCACGTGCTTACGATGCTGCTGCTTTTCATTTTCGGGGTCACAAGGCCATACTCAACTTCCCTAATGAGTACGGTCACACCACTCATCATCCTAACACGTTTTCAACTTCGCTTCCTCTTCATTCTTCTTCTTCTTCTTCTTCCTCTTCTTTTCCTTCTTACTCTGGTGGCGAGGGTTCGTCACAACAACAGCGAAATGTTGATGCAACTTTTGAATTGGAATACTTGGACAACAAGTTATTGGAAGAACTCCTTCAGGCGCCTGATGGAACAGGCAACGACTCCAATTAA 456 0.4649 MEGGRGVVNGNASNAEVRYRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTAEQAARAYDAAAFHFRGHKAILNFPNEYGHTTHHPNTFSTSLPLHSSSSSSSSSFPSYSGGEGSSQQQRNVDATFELEYLDNKLLEELLQAPDGTGNDSN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00361 151 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Lapu6g00361 151 PANTHER DNA-BINDING DOMAIN 14 140 IPR044808 GO:0003700|GO:0009873
Lapu6g00361 151 MobiDBLite consensus disorder prediction 77 124 - -
Lapu6g00361 151 Pfam AP2 domain 18 69 IPR001471 GO:0003700|GO:0006355
Lapu6g00361 151 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Lapu6g00361 151 MobiDBLite consensus disorder prediction 80 124 - -
Lapu6g00361 151 FunFam Ethylene-responsive transcription factor 2 17 77 - -
Lapu6g00361 151 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Lapu6g00361 151 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Lapu6g00361 151 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Lapu6g00361 151 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Lapu6g00361 151 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00361 Lapu-Chr6 3547418 3547873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00361 13 142 AP2-EREBP Transcription Factor Family AT3G23230 60.305 1.87e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lapu6g00361 AP2 3.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00361 - - gmx:100778998 212.231