Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00356 ATGGCACTGAACCACAGCCCCTCTTACAAGCTTCTACATCAACTTTCCCCACTCATCAAAACTCATGCTAGCACAATCCGTCACACACTAAAACCTGCTTCAGATTCTGCTTCCGCTTTACCCATACTTGCCATCATTGTTCCCAGCATCTTTGTAACTGCTTTCATACTCATCACCTACTTAACTCTTGTGACCAAATGCTTCTCAAACTGTTACCTACTTAACCCCTTGAGATGGATTTTCAACCTACGTACCCTACAACATGAAGATCAAGACTCCTTCATAGCACTCTCTTCAAGGATGAGGAGCCAAGGACTTGATGAATCTGCCATCAGAGAAATCCCAACACTTCAATTCACAAAAGGAGATGTTGAAAAGAATCAAAGTGTGTATGGCTGCCTGGATTCTCAATTGCTCTCTTACATGGGCAGTGATGAGGAATTCGTGGTCATTGAACTAGGGGAAGAACATGGGGCCGCACTGCCCCAGATGCAGCAAGAAAGAAGTGACTCAAGGGAAGGAGTAGTAGAGAGTAGAAGTCATTCTATTGTAAGGAAGTGTCACCATGTTTCCATCATGGGAGATGAGTGCATTGATGTTAGGAAGAAAGATGAGCAGTTTTCTATTCAGCCTATTCGAAGATCTTTCTCAATGGATTCGGCAAAAGATTGGCAAGTTTACTTGGATTTTCAAACCATCATGCAACAGAATAAATAG 717 0.4268 MALNHSPSYKLLHQLSPLIKTHASTIRHTLKPASDSASALPILAIIVPSIFVTAFILITYLTLVTKCFSNCYLLNPLRWIFNLRTLQHEDQDSFIALSSRMRSQGLDESAIREIPTLQFTKGDVEKNQSVYGCLDSQLLSYMGSDEEFVVIELGEEHGAALPQMQQERSDSREGVVESRSHSIVRKCHHVSIMGDECIDVRKKDEQFSIQPIRRSFSMDSAKDWQVYLDFQTIMQQNK* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00356 238 PANTHER RING-H2 FINGER PROTEIN ATL16 140 238 IPR044600 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00356 Lapu-Chr6 3502615 3503523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00356 142 238 C3H Transcription Factor Family AT1G04360 40.496 2.79e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00356 K19041 - gmx:100802567 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00356 6 3502615 3503523 Lapu6g00356 6 3502615 3503523 ECH