Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00355 ATGTTTAGCAGGCCAAGGGGTGCCAGTGCTTTTAGTATATTCAAATGGAAACAACCAGGTGCATCATCTCTGACAACAGGTTTACTTCAGGAAGATCAGCCAGAGATTGAATTGTCTGATTATGGAAAGATTCCTAGTCCAGGCAGCGAGAGCCCTTCGGGGCTTCTTAATGGTGACAGCCTAAATGTGGAACCAATTTCCGATTTGGATCTCTTCTTTGAAAGGCTTTATAACTATTACTGTGAGAAAGGACTATGGTGCATCATTATAAAATGGATTGTTGAACTTCTAAGTCTGGGGTTCACCATATGTTTTTCAGGATTTTTTTTACTATATGTTGACTGGAATGGACTCCGAAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGGATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCCTTGACACCACTAACAATTACCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCTATCTATTGGATTTTTTGCTTCTTGAGATTCTTTGCACAACTAAAGGATACCCTAGAAATCAGGCATTTTTACTACAACAGTCTCCATGTTACTGACAATGAAATTCAAACCATGCCATGGGCTACAATTCTTGAAAAAGTTGTTGTGCTACAAAGGTCTCAACAACTTTGTGTGGTAAAAGATCTTTCTGCCCATGACATTGTCATGCGGTTGATGCGGAAGGAAAACTACTTAATTGGAATGCTCAACAAGGGTGTGCTAGCTTTCCCTATTTCACAGTGGTTTCCAGGTGCTGGTCCTACAATGAGATTTGGTTCTAATGGAACACAGAATCGTGTAATTCTAACCAAGACGCTGGAGTGGACTTTGAATTGGTGCATCTTGCAAAGCATGTTTGATCGGAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCGAAGACATTACAAAGAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTCTCTCCATTTCTTGTCATATTCATGCTAGTATATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCACCCTAGCACCGCATCATCTCGCAGATGGTCAAATCTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCACCGGATTAATAGCAGTGTATTGCATGCATCTGATTATCTCAAGCAATTTCCTTCGCCAATCATATCTATCATTGCAAAATTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAGTTCTGATCATCATTGCTTTTCTTGAGGAGTCTCTATTAGAGGGCCATATATTTGGTCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCCATTACTGATGAGCTTCTGGTCTTAGATGCTGAAGGAGCTATGTCTATGGTGGTTCAACATACTCATTATCTGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAAACGGTTCGTGTTGAGTTTGCAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCTTCAATTTTCCTCACTCCATACTTACTTCTGTTTATTGTCCCAAAGCGGGTTGATGATATCTTGCTTTTCATTGCTGATTTCACTGTAAATGTTGAAGGTGTTGGGCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAACATGGAAACAGTCATTATGGTTCCCCTTGCAATGCCCCTCGTAGCCGGAGAAGTTCTCAAGGGAAGATGGAGAAATCCTTGCTGAGCTTTCAGAGTAGTTATCCATCATGGGAACCAAGCGCACAGGGAAAACAGTTTTTACTAAATCTTAGAAAATTCAGAGAGGAAAAGTTACCAGTACATGGAAACATACATGCAGCTTCCCCTCCCAGAATGTGGAGGGGTATTTCCAACATGGGAAGCAATATTGGAGACCGAAACAGGTTTATGTCCAGGGAAATGCCATACAGTACTTTTTTAACTGGCAATCACTTGGGTTCTTTGTGGTTGATTGAAGCCAACCAAAATAATCATCCCTATCTCCTTGATTGGTACTATACATCTCGATCTTATGACGTAAATCAAGGAGACGATCCTTCAGAACCGTTGGGAGTAATAGAGCATCATTCTAGAGAGCATTGGATTCCCTCCAATATGACATACAATGAAAGTGGGTATGAGGAATACTCAAACGAGAATCGTCAAGGTTGGGCTGATTCTCATCTTGCAACTTCCACATCCGTTCCCATTTTCAGGGAAAGCTCAATTCGGGATCAAAGTTATAATGAACAAACCCATGCTACCAGGAGTCATTGGTGGGCTAGAAGTCACGCGCAGCAGGGTGGACAGAATCAGACAAGCTTTTTTGAGCCTCCAGATTTCATTCAGGAAAGATATAATTATTATGATAAGTTTTCTGATAGAGGGTCAGAGGATCAAGATCGTGAACAACGGTTGTACTCTAGAGATAATCACAGATTATCTAGAACATACACAGATGACTTAGGGGCTGCGGAAGTTAATCTTCATTTTGATGATATTTATAGCAGACCTCCAGAAACCCCACCTGCAAGCTTTTGA 2580 0.4109 MFSRPRGASAFSIFKWKQPGASSLTTGLLQEDQPEIELSDYGKIPSPGSESPSGLLNGDSLNVEPISDLDLFFERLYNYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTITKAIIVGYLGIFSIYWIFCFLRFFAQLKDTLEIRHFYYNSLHVTDNEIQTMPWATILEKVVVLQRSQQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPTMRFGSNGTQNRVILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLQRRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINSSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITDELLVLDAEGAMSMVVQHTHYLPKRWRGKESTETVRVEFATLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILLFIADFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPCNAPRSRRSSQGKMEKSLLSFQSSYPSWEPSAQGKQFLLNLRKFREEKLPVHGNIHAASPPRMWRGISNMGSNIGDRNRFMSREMPYSTFLTGNHLGSLWLIEANQNNHPYLLDWYYTSRSYDVNQGDDPSEPLGVIEHHSREHWIPSNMTYNESGYEEYSNENRQGWADSHLATSTSVPIFRESSIRDQSYNEQTHATRSHWWARSHAQQGGQNQTSFFEPPDFIQERYNYYDKFSDRGSEDQDREQRLYSRDNHRLSRTYTDDLGAAEVNLHFDDIYSRPPETPPASF* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00355 859 PANTHER APG9 AUTOPHAGY 9 2 810 IPR007241 GO:0006914
Lapu6g00355 859 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00355 Lapu-Chr6 3491295 3499498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00355 K17907 - gmx:100777405 1536.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00355 6 3491295 3499498 Lapu6g00355 6 3491295 3499498 ECH
Lapu6g00355 6 3491295 3499498 Lapu7g00278 7 3327426 3330668 PCT