Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00354 ATGGGTACCAACTTGCACCAAGTACTCAGAAGCCTCTGTTTGAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATAACAATCCTGATGATTATGACTCTTCAGGAAATAACCACTGCCAGAAGATCTTGGAACAGATTGGTTGTGGGAAATTTTCGCACAACGCATTAGGGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTTGCCGTTACAGGAAAGCATAGGTGGATCTGTGCAGATAATCAAGTTGCAGGTTCTGGCTTATCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCAGTAGCCCCACTTGGTGTTGTTCAGCTTGGCTCTCTTAATAAAGTGATTGAAGATATGGGATTTGTAACTCATATCAGAAATCTCTTCTTGTCTACTCAAAATTACTCAATAGCCCAATGTCCTAACCAAATACAGGGTAGTTTGAAGAGTTCTTTATCTCAGCTGGATATATTGAAGGAAAAATTGACTTCAGATGTTATGCCTACTGGCTTTTACAATACACAGAAATCTATGAAGAGTGAAACAGCAGATGTTTTAGTGCCCCTTGAATGTTCTGAGAGGACCTATGCACCTCATTCTGCATGTGACGTGGCCAAGCAAGAGGGGCCTGAATTGTATAGTGATGAAAGTTCCATTTTGCTTCAGTCAATATCTAATATGATGAATGTGGAGCATCAGGATTTTGAAGAGATGAAACCTCTTTATGGGAGGAAGTGTGAAGAAGGAAGTAGTGGCTGCAAAGATCTGAGGTTGGAATCAGAAAACAATGTCTCGTCATTTTTAAGTGACTTCGTTATGGATAATGATTTAATATGTCCATCAGAAAAAGTTAGGGTTGATTCTGCATGCTTTCCTTCAGCTTTTCTTGATACAGTTGTTTGTGAAACTGATAAGTTGCATTTTGTGGATATTAACCAAAAAGGGGTGTTGAATTTCACACAACCTTCAGATGCAAACTCCCAACATGTTGAAAAGTCAAAGTTTTGTACTGAGCCTTCTTATAAGGATATGTCTCATGTGTTGAATTTCCCTGCTGGCTGTGAACTACATGAAGCACTTGGACCATCTTTTCTTAAAGGGAGTAAATGTTTTGATTGGCCACCACAGGTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGGTTAGCACTAGCCAATTGACTTCTGAATCTCCTCCAGAGCATCTTTTGGAAGCAATGGTGGCCACCATTTGCCATAGTAATAATGATGTTAATAGTGAATTATCATTTTGTACATCAATGCAATCTGCAATGGCCTCTGGCAAAAATCACGAAGCATCTACTCTCAATGTGTATGGTATTAATTCAGAAGGTTATTCAATAGATCAGCTCTCTCTTGTCAAAGAGGACAAACACAATTCTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCCTCAAAAGGTGTTTCGTCTACATTCCCTAGTTCAAGTAGTGGACAACTTGAAAGATCGTCAGAACCATCTAAGAACAGCAAAAAGAGAGCCAGGCCTGGGGAAAGCTGTAGGCCTCGACCAAGGGACAGACAATTAATCCAAGATCGTATTAAGGAGTTGAGAGAGCTTGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAGCGTGCAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGGTGATACAAAGTCAAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAGGTAGGGGGTCATCTGAAAGTGCATTCAATATTAGTAGAGAATCTTAGCAAGAATGGGCAGATGCTTGTTGAGATGCTCTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAGGGTGGAACTAAAGTTCACGGTGAAAAGATATGGATATGCTTTGTTGTCGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAAAGCACGGTGTATTCACAATAA 2205 0.4063 MGTNLHQVLRSLCLNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSGNNHCQKILEQIGCGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVAPLGVVQLGSLNKVIEDMGFVTHIRNLFLSTQNYSIAQCPNQIQGSLKSSLSQLDILKEKLTSDVMPTGFYNTQKSMKSETADVLVPLECSERTYAPHSACDVAKQEGPELYSDESSILLQSISNMMNVEHQDFEEMKPLYGRKCEEGSSGCKDLRLESENNVSSFLSDFVMDNDLICPSEKVRVDSACFPSAFLDTVVCETDKLHFVDINQKGVLNFTQPSDANSQHVEKSKFCTEPSYKDMSHVLNFPAGCELHEALGPSFLKGSKCFDWPPQVNQDMKTVEMSDEVSTSQLTSESPPEHLLEAMVATICHSNNDVNSELSFCTSMQSAMASGKNHEASTLNVYGINSEGYSIDQLSLVKEDKHNSLSSSSGICGVMSSKGVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTDFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSTVYSQ* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00354 734 MobiDBLite consensus disorder prediction 524 538 - -
Lapu6g00354 734 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 731 IPR043561 GO:0003700|GO:0006355
Lapu6g00354 734 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Lapu6g00354 734 MobiDBLite consensus disorder prediction 539 563 - -
Lapu6g00354 734 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 548 597 IPR011598 GO:0046983
Lapu6g00354 734 MobiDBLite consensus disorder prediction 524 563 - -
Lapu6g00354 734 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 561 602 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00354 Lapu-Chr6 3464349 3472195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00354 1 729 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.481 5.71e-153 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00354 - - ccaj:109796613 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00354 6 3464349 3472195 Lapu6g00354 6 3464349 3472195 ECH