Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00351 ATGGCTTCTGCAAGTGGAAATGGTGGCTCCAATGGCTCAGGCTCTCCTTGCGGAGCATGCAAGTTCCTCAGGCGAAAGTGTGCAGCTGACTGCATCTTTGCACCTTACTTTTGCTCAGAACAAGGCCCTGCTAGATTTGCAGCCATACATAAAGTGTTCGGTGCCAGCAACGTTTCCAAGTTGCTTTTGCATATACCAGCTCATGATCGTTGTGAAGCCGTTGTCACAATTGCTTATGAGGCTCAGGCTCGTATCAGAGACCCCGTCTATGGCTGTGTCTCTCACATTTTTGCCTTACAACAACAGGTGGCATGCTTGCAAGCACAGCTGATGCAGGTGAAGTCTCAGCTGGCTCAGAACCTGATGGAGTCCAGGAACATGGAGAATAATCATCAGTGGCCAGGGAATCAAAGTGTTGCAGGACAGCCAATGAACCATCCATTTTGTCCCACTTACATGAACCCTATATCTCCTCAAAGCTCTCTTGAGTCAATTGATCACAGCAGCATCAATGATGGAATGAGCATGCAAGATATACAAAGCAGAGAGGATTTCCAAATCAATGCTAAGGAAAGAGCATACAACAACAATGACTTGGGTGAGCTGCAAGAACTGGCACTCAGAATGATGAGGAACTGA 639 0.471 MASASGNGGSNGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKSQLAQNLMESRNMENNHQWPGNQSVAGQPMNHPFCPTYMNPISPQSSLESIDHSSINDGMSMQDIQSREDFQINAKERAYNNNDLGELQELALRMMRN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00351 212 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Lapu6g00351 212 Coils Coil 96 116 - -
Lapu6g00351 212 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
Lapu6g00351 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00351 Lapu-Chr6 3413734 3415075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00351 3 212 AS2 family AT2G42430 53.689 5.40e-80 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu6g00351 LOB 6.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00351 K13944 - gmx:100801508 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00351 6 3413734 3415075 Lapu6g00351 6 3413734 3415075 ECH
Lapu6g00351 6 3413734 3415075 Lapu7g00739 7 8700551 8701777 PCT