Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00337 ATGGGAGATATGCAGAAAGATTATGATGTCGAAACCAGTTTTACACAGATCATCGTAGCCTTTTCTGTTGGGTTGTTGTTTGTCGTGGTCTTTCATTATCGTCTGAAACAAACTAGAGATCGAAAGATCATTCCACGTATAAGATTATCACGCGCAAGCCACGTCCCAAAGCTTGAAAGATTCTCCCATTACGTAGCTAGGCAAATGGGGTTCAAAGACAGAAGATTTTGTCCCCATCTATGTAGATTAGCTTCTGAATACATAAGGAAATGCGAGGGATTTGAAGATGATATATACTCCTTTTTTGAGAATGAACCTGATGCCGATTCACTTTATGTGAAGCTGGTAGAGGAGTTTGAGAGATGCATTCTTAGTTACTTGGCATTCCATTGGAACTACGGTGACACAATTATGAGTCAGGTGTTGAGCTCGGAAAATGAGCCAAAAAAGAGGCTCAAACACATAGTTATGGCAGCAACTAGGGAACAAAGGTTCGAGAGACTTGCCAAGAATCTGAAGGTGGCTAGAGTTTTTAATACATTAGTGGAAGAAATGAAAGCGATGGGAGTTGCTCCAAATGACGACTCTCAATGTACAGAGGTGATGGCTCCAGTAGCTCATAGCGACAGGAGTCCAGTGCTCCTTTTAATGGGTGGAGGCATGGGAGCTGGCAAGAGCACCGTGCTCAAGGATATTCTCCAAGAATCTTTTTGGGCAGGAGCAGCCGGGAATGTCGTAAACATTGAGGCAGATGCTTTCAAAGAATCAGATGTCATCTATAAGGCCCTTAGCTCAAGAGGTCACCATGACATGATTCAAACAGCAGAACTGGTACACCAATCATCCACAGATGCAGCCTCATCACTCCTAGTTACAGCACTAAATGAAGGCCGAGATGTTATTATGGATGGCACACTCTCTTGGGTGCCATTTGTTGTTCAGACAATTACAATGGCTAGGAATGTTCACCGTCGCCGTTACCGCATGGGAGCCGGCTATAGGGTGAAGGATGATGGAACTGTAATTGAAAACTATTGGGAAAGAATTCAAGGCGAAGAGCCTGAACAAGTAGAAGGCAAAAAGCGAAAACCATATAGGATAGAGCTGGTTGGTGTAGTATGTGATGCTTATCTTGCAGTTGTTAGAGGCATAAGGAGAGCTATCATGTGCAGAAGAGCAGTGAGAGTAAACTCACAGTTGAAATCACACAAGAGATTTGCTGAGGCATTTATGACTTACTGTCAACTAGTAGATAATGCACGACTATACTTCACAAACGCATTGGAAGGTCCACCCAAGTTGATAGGATGGAAGGAAAGAGACAAGACACTGCTTGTTGATCCAGATGAATTCGACTGTGTGAAGAGGCTTGCCAAGTTGAACGAAAATGCCAACTCCATTTACGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCTGGATCAGTATGGAAAGACATCGTATTATCCCCTTCACGGTTGAACATCCAACAGGAGCTCAAGTATTCAATCCAAAAAATTGAAAGCGTGAAATATAACTTCACCCTTGACTAA 1554 0.4311 MGDMQKDYDVETSFTQIIVAFSVGLLFVVVFHYRLKQTRDRKIIPRIRLSRASHVPKLERFSHYVARQMGFKDRRFCPHLCRLASEYIRKCEGFEDDIYSFFENEPDADSLYVKLVEEFERCILSYLAFHWNYGDTIMSQVLSSENEPKKRLKHIVMAATREQRFERLAKNLKVARVFNTLVEEMKAMGVAPNDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILQESFWAGAAGNVVNIEADAFKESDVIYKALSSRGHHDMIQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGAGYRVKDDGTVIENYWERIQGEEPEQVEGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVNSQLKSHKRFAEAFMTYCQLVDNARLYFTNALEGPPKLIGWKERDKTLLVDPDEFDCVKRLAKLNENANSIYELYKHPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQKIESVKYNFTLD* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00337 517 Gene3D - 195 431 IPR027417 -
Lapu6g00337 517 PANTHER UNCHARACTERIZED 5 512 IPR044802 -
Lapu6g00337 517 Pfam Zeta toxin 206 318 IPR010488 GO:0005524|GO:0016301
Lapu6g00337 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00337 Lapu-Chr6 3235357 3239604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00337 - - gmx:100794775 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00337 6 3235357 3239604 Lapu6g00337 6 3235357 3239604 ECH
Lapu6g00337 6 3235357 3239604 Lapu7g00726 7 8492313 8494402 PCT