Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00333 ATGCCTCTTTCTGCCTCTCTACTCGAACTTCAACCCTCTTCACTAAAGAAGAAAACTGCTGTTTCCAGAAGTTGGATTCTGCTGAACCACCATGGCAAACCCACTGTGCTGGATGCGGATAAACATGCTATCATGCGCCTGGTTAAAATTCACGCCAGAGATCTTCGGATTCTCGATCCTCTCTTATCCTATCCTTCCACCATTTTGGGCAGAGACAAAGTCATTGTTCTCAATTTAGAGCACATTAAAGCTATTATCACTGCAGATGAGGTGTTGCTAAGAGACCCAACGGATGATGACGTTGTGCCAATTGTTGAAGAGCTTCGACGACGGTTACCCAAAGTAAGTGCTTCCGGGCAAGGCCAAGGAGAAGAAGAGGCGTGTGCTCAAGATGGTGAAGGGGAAGACGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGTTTTATTTGAGGCAATTTGTAGTTTCCTTGACGCACGAACGAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTTACCTCTACGATTAGCAGTCGTAATTTGGATAGAGTGAGAAAATTGAAATGTGCAATGACGAGGTTGACAAGTCGTGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGACGACGACGACATGGCTGAACTTTACTTATCAAGAAAGTCGACTGTTTCATCATCTCCGACAAGTAGCTCTGATGCTCCCAACTGGCTTTCTGGTTCTCCAAATACAGGTTCTAAAATACACAAATCAAGCAGAGCAAGTGGAACAACAGTTCATAGGGAGAATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCCAATTTCATGCAAATTGACGGTACATTAAATAAATTGGCCACTTTGCGAGAATATATCGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAGTTGATTCAGCTAGAGCTCTTCATTAGTGCCGGGACTGTGTGCATGTCCTTGTATTCATTGGTGGCTGCAATATTTGGTATGAACATACCATACACATGGAAAGCACCAGGCCACGAACACGTGTTTAAATGGGTGGTGATCTTTGCGGGAATGGTTTGTGCATCCTTGTTTTTATCCATAGTATCTTATGCCCGACGCAAAGGTCTTGTTGGGTCTTGA 1167 0.4327 MPLSASLLELQPSSLKKKTAVSRSWILLNHHGKPTVLDADKHAIMRLVKIHARDLRILDPLLSYPSTILGRDKVIVLNLEHIKAIITADEVLLRDPTDDDVVPIVEELRRRLPKVSASGQGQGEEEACAQDGEGEDENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSTISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMAELYLSRKSTVSSSPTSSSDAPNWLSGSPNTGSKIHKSSRASGTTVHRENDVEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKAPGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00333 388 Gene3D - 7 96 - -
Lapu6g00333 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 386 IPR039204 -
Lapu6g00333 388 Coils Coil 188 215 - -
Lapu6g00333 388 Pfam CorA-like Mg2+ transporter protein 277 375 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lapu6g00333 388 CDD Mrs2_Mfm1p-like 25 385 IPR039204 -
Lapu6g00333 388 Gene3D Magnesium transport protein CorA, transmembrane region 104 317 - -
Lapu6g00333 388 MobiDBLite consensus disorder prediction 115 135 - -
Lapu6g00333 388 MobiDBLite consensus disorder prediction 226 266 - -
Lapu6g00333 388 FunFam Magnesium transporter MRS2-1 13 96 - -
Lapu6g00333 388 MobiDBLite consensus disorder prediction 226 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00333 Lapu-Chr6 3184551 3189255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00333 1 361 MRS2 Gene Family AT5G64560 70.732 1.04e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00333 K16075 - gmx:100799368 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00333 6 3184551 3189255 Lapu6g00333 6 3184551 3189255 ECH