Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00311 ATGTACGGCGATGAAAGCGACAACAGCAGCGACGGTGGGGAGTGCAGGCGGCGGGGGGAGACGCTGGACTTCGGGAACCTGAAGGTGGTGTCGGCGGTGGGACGCGGCGCGAAGGGAGTGGTGTTCCTGGCGCAGGCGGTGGGAGAGGGGAGCGGGGAGTGGATAGCGCTGAAGGTGGTGTCAAAGGAGCTGCTGAGGAAGAAGAACAGGAATGAGGGAAGGTGCAAGAGGGTGTCGTTCGAGAGGCACATACTACGTCGTTTGGATCACCCGTTATTGCCCAAGTTCCGAGGCGCAGTCGAAACCGACCAACTCATCGGCTTCGCCATCGATTATTGCCACGGCGGAAACCTCCATTCTCTCCGGAAGAAGCAATCGGAGAAGACCTTCTCCGAAGAAACCGTAAGGTTTTACGCAGTAGAATTGGTTCTAGTATTGGAGTATTTGCACAACTTTGGAGTAGTATACAGAGATTTAAAGCCAGAGAATATCATGATCCAAGAATCAGGTCATATAATGTTGGTGGATTTTGACCTTTCGAAGAAGCTAAATCTTAGGTCAACTTTCTCTAGTAGCAACTCCTCACCAGTCTCTGGCTTCTCACCAGGAAAGGATCGAAGGAAGGGACGATTATCACGATTCAATTGTTATTGTCATTCAGGGATATCCTTGTATGACTCAGATATTTCAAGTCAACTTAACATCATTCCAACGCGTCATAGCATGTCAGATTCAGTGGAAAAGTCTAACTCCTTTGTGGGAACAGAAGATTATGTTGCACCTGAGGTCATATCAGGAGAAGGACACGATTTCGCAGTTGATTGGTGGTCATTAGGCATTGTTTTGTATGAAATGAGTTATGGAGTGACACCATTTAAGGGTGTGAATAGGAAAGAAACATTTCATCGTATCATAACTAAGGAGCCAGATTTCACAAGTGGAAAAACTCATTTCAAGGACTTCGTTAAAAAGTTGCTTGAAAAAGATCCTAATCGTAGAATTAATGTAAATGAGATTAAGAACCATGATTTCTTTAAAGGTGTTAGGTGGGACACAATCTTGCAAATTTCACGCCCACCATATATTCCTCAAAATGAGATCAAAGATTCAATTGGATTTTGTCAAAAAGATGTAGAATCATTTGTTCATGGAATCTTTTTTCCAAAGAAAAGAAACCCCAAAGGAGGACAATAA 1194 0.4464 MYGDESDNSSDGGECRRRGETLDFGNLKVVSAVGRGAKGVVFLAQAVGEGSGEWIALKVVSKELLRKKNRNEGRCKRVSFERHILRRLDHPLLPKFRGAVETDQLIGFAIDYCHGGNLHSLRKKQSEKTFSEETVRFYAVELVLVLEYLHNFGVVYRDLKPENIMIQESGHIMLVDFDLSKKLNLRSTFSSSNSSPVSGFSPGKDRRKGRLSRFNCYCHSGISLYDSDISSQLNIIPTRHSMSDSVEKSNSFVGTEDYVAPEVISGEGHDFAVDWWSLGIVLYEMSYGVTPFKGVNRKETFHRIITKEPDFTSGKTHFKDFVKKLLEKDPNRRINVNEIKNHDFFKGVRWDTILQISRPPYIPQNEIKDSIGFCQKDVESFVHGIFFPKKRNPKGGQ* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00311 397 FunFam Serine/threonine-protein kinase OXI1 247 364 - -
Lapu6g00311 397 Gene3D Transferase(Phosphotransferase) domain 1 246 364 - -
Lapu6g00311 397 Gene3D Transferase(Phosphotransferase) domain 1 117 186 - -
Lapu6g00311 397 Pfam Protein kinase domain 247 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00311 397 Pfam Protein kinase domain 29 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00311 397 Gene3D Phosphorylase Kinase; domain 1 28 116 - -
Lapu6g00311 397 PANTHER FLIPPASE KINASE 1-RELATED 17 367 - -
Lapu6g00311 397 ProSiteProfiles Protein kinase domain profile. 27 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00311 397 SMART serkin_6 27 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00311 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Lapu6g00311 397 SUPERFAMILY Protein kinase-like (PK-like) 24 369 IPR011009 -
Lapu6g00311 397 FunFam Serine/threonine-protein kinase OXI1 117 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00311 Lapu-Chr6 2872679 2875280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00311 17 394 AGC Kinase Gene Family AT3G25250 54.145 3.00e-137 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu6g00311 Pkinase 7.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00311 K20714 - gmx:100813693 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00311 6 2872679 2875280 Lapu6g00311 6 2872679 2875280 ECH