Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00286 ATGGATTTTGTGTTGGTGGATCCGGAAAAGGCAAATGAAGCCGAGCATAGCTGTCTAGAAGAGAGTACAAGTATATTTGAAGGAATTAAAATTCAAGAGCCATATGTGGGAATGGAATTTGATTCAGAAGTAGCTGCTAGGAAATTTTATGTTGATTATGCCAGACAGTTAGGATTTGTTGTACGTATAATGCAAAGGCGACGTTCTGGAATTGATGGGAGGACTCTTGCTCGCCGACTTGGATGTAACAAACAAGGATTCTCCCCAAATACCAAGGGAGCACTGGGACCAGAGAAAAAGCCAAGACCTAGTGCCCGTGAAGGTTGCGAGGCAACTATTTTGGTTAAATTAGAAAAATCTGGAAAATGGGTTGTCACCAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACGGCTAATGGGTTTGGCACAGTGGGTGATAAAGATAAGAAAATTTCAGAACTTACAATGGAGTTGGAACGCCAAGATCAACTATGTGCTGCATATCGAGAAAAACTGCTCAGCTTCATAAACAATGTTGAGGAGGAGACAGAGGAACTGTCCACAAAAATTCAACTCATTATTGAAAATGTAAGGAGAGCTGAGTCAGAAATGAAAAAATGTTCACTGAACAGAAAGCCTTTGTGCTTAACCCGAGTGTATAAATAA 672 0.4018 MDFVLVDPEKANEAEHSCLEESTSIFEGIKIQEPYVGMEFDSEVAARKFYVDYARQLGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNTKGALGPEKKPRPSAREGCEATILVKLEKSGKWVVTRFIKDHNHPLIATANGFGTVGDKDKKISELTMELERQDQLCAAYREKLLSFINNVEEETEELSTKIQLIIENVRRAESEMKKCSLNRKPLCLTRVYK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00286 223 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 201 - -
Lapu6g00286 223 Coils Coil 178 205 - -
Lapu6g00286 223 Coils Coil 153 173 - -
Lapu6g00286 223 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
Lapu6g00286 223 MobiDBLite consensus disorder prediction 85 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00286 Lapu-Chr6 2582084 2590588 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu6g00286 FAR1 1.5e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00286 - - vun:114183030 412.535