Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00272 ATGTCCTTCAATCAACCAAAGTCCGATAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGCTCCTCCGGCGGTGCGTACGGCAGGGGCGGCGGTGGCGGCGCCGGGCCTTCTCCGTCGCTCTCCTCTAATCGGAGTTTTAACAAGAAGTCTAATAACAATGCACAAGGTGGGCAATCTAGGGTAAACCCTACACTCGTGAATTCGGCTGAGTCTAATAGTACTTATGCAGCCCGGACTGTACCAAATGGTTCCCATGTACAGCCACAGCTTCACGGAGGATCTGATGCGCCGGTTACAAATGCAACTGCCAAGCCTTTTGAATCGTCAGCTGTGCAAAGGAGCACCAGAGCTGTTCCAAAAGCTCCTACTTCTCAACCTCCCTCCATGAGTTCTGATCCAGCAGCTCCTACAACCCCTGCTAAGGATGCATCTAAGGCATTTCCTTTCCAATTTGGATCCATCAGTCCTGGCTTTATGAATGGGATGGCTATTCCTGCTCGCACAAGCTCGGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGACATGATTCTTTTAGACCTGCACCCTCAGTGCCAACACCTCCTGTTCCAAAGCAGCAGGCAGTGAAGAAGGATACAGGTGTTACTGACCAATCTAATGCTGGGGAGACTCATACTGCGACCAGGGCAAAAAAGGATACTCAAGCGTCACCGTTACCCCCAGCAAGCCAGATGCAAAAGCCTTCTGTCATTCCTTTAACTGGAATTTCAATGCCAATGCCATATCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCTAATCCACAGATTCAATCTCAAGGTATGTCATCAGCTCCACTTCAGATACCATTGCCAATGCCTTTGCCGATTGGAAGTGCCACACAAGTTCAACAACCGGTTTTTGTTCCAAACCTTCAACCTCATCCTATCCATCCTCAGGGAATCATGCATCAAAGCCAAAACATGGGTTTCACCCCTCAAATTGGCCCTCAGTTGTCCCATCAGTTAGGCAACATGGGTATTGGAATTAGCCCACAATATCCACCACAGCAAGGAGGAAAGTTTACTGGTCCTCGTAAAACTACTCCTGTCAAGATAACTCATCCCGAGACACATGAAGAGCTAAGACTTGATAAGAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGTGAGGCCTCATTCTGGTATGGCTTCTCAGTCTCAGCCTGCCCAACAATTTGCAGCTTCTCATCCTATTAATTACTATCCATCCAGCTCTTATGGTACCAATTCTCTCTTTTATCCAACTGCTAGTTCTCTTCCATTGACAAGTAGCCAGATAGCTCCTAACTCCCAGCCACCCCGATTTAATTATGCTGTGAGCCATGGTCCGCAGAATGTTAGTTTTGTAAATTCATCATCTCATACTTCTCTGCCTGTTAATAAAGCTGGCACTCCTATTCCTGGAACTGCTGAACCGCCTAATCCAGAATTTTCCCGCGATGTGCATAATGCAATCTTGTCTGCTCCATCTGGAGTAACTTCTGTGTCTATTAAGCCAAGTGGTGGATCTGGTGCTGCAGATTCATTTGCCAATTCCAGTACTCAAAAGAGTGTTTCTCCTAGTTCTTCATTAACATCTGGTGATGCTTTGTCTTCTGCACCACTAAAAGGGTCTGAAATAGCTGAAATATCTTCCCAGCAGTCCAAGATATCCACTGATTCATCAGTTTTGAGCTCATTTCCAAATCTATCTGCTGCGAAGCCTGCATCAGCTTCCTTGGTGCTTTCTACATCTGCTGTTAGTGAAGATTCTGTTTCAGCTATACCTAATAATGAAGGCAGAAAGAACGAATCTGTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAAATACAGAAGAAAGCCCAGTCACAGCATCAGGTTGCTGTGCAATCTCCTGCCGTGGTTAATGTGCCTTCCCAAGCTGTTGATGGTGGTATCCCTGATGAAGTTTCTGAAAGTGTGGGAGCTAAAACAAACCATTCTGCAGTAATTACCAGTGAAAATCTCTCAGCTGCAGCTTCGGGCTTGTTATCAGCTACTAGTGGCAGCATACCTTATGCTGTTGAAATGAAAAGTGATACTACACAAGTGCCGGTTCGTGCTTCAGCTCAAGGACCTTTAATAGGGGTGGATGATTTTAACAATCATAAGATTGCTGAGCTAGATGAATTGTCACAACAGGATAAACTATTGCAGCCAAATATTATGGAATTGACTGGTAAAACAGAAAACTTGTCTCTTGAAGGATGTAACCAAAATGTTAGTGAGGCTGGAACAGAATTAAAACAAACTAAGGATGGTGCTGTAAAGCTAAGCACTGAGGTTGGAGCCTTGAGGTCTGTGCAGCTAGGGCAGGATGAATCTGCAAGTTCTAGTGCAGGATGTGATGGGACAGCTGATAATACCAAAGATGTGTCCTTAATCAGAAACGACAGTGTAATGAGTAATGAAGCTGTTGCTACAAATTCTGGCACATCAGATCAGCAGTCTGCTGATATATTAGAAACATCTTCTAAGCATTTGAAGGATGGTTCGGACAGTACTGGCAGTGTTGCAGTGTCTCTTCCGGCATCAGGTACCAAGGACAAACCGGTTTCAGAGCCTAGTAAGGTGAAACCTACGTCAAAGGGAAAAAAGAAAAGAAAAGAGATTCTTCTGAAGGCTGATGCGGCAGGGTCAACATCTGATCTCTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAATCTGTGATAAGTGCAGAGAAAACAGAAATTGATTCTGCTTCTGGAAATTTAGAGCAGTTGCCTAGTGATGCGGTACAGTCAGATGCTGTAGCAAACAAGCAATCTAAGCAGAGTAAAGCTGAACTTGATGATTGGGAGGATGCTGCTGACATGTCTACGCCAAAACTAGAAGTTTCAGATGAAACTGAACAGGTTAGTGAAGGAAGTGCAGTTACTGCCAAAAAGTACTCAAGGGATTTCCTTTTTAAATTTGCCGAGCAATTCACTGATCTTCCTGAAGGGTTTGAAATCACAGCAGACATAGCTGAGGTTTTGATAAATCCTAATTTTAGTTCTCATGTAATTGAACGTGATTCACCTTCTACGGGAAGAATTATTGATAGGTCAGGCAGCATGTCTCGTCGTGGCAGTGGTATTATTGAGGAAGACAAATGGAATAAAGCATCCAATGCATTTCATTCTGGTATGCGTTTGGATGGTGTTGGTGGTAATGCAGGATTTCGTCCTGGCCAAGGTGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAGACACCTATGCAATATGCTGGAGGGATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAGAGAAATAGCCCTGATGGAGAAAGGTGGCAGCGTGCTACAAACTTCCAGCAGAGGGGTTTAATTCCATCTCCTCAAACTCCTTTACAGATGATGCACAAAGCTGAGAAAAAGTATGAGGTGGGTAAAGTGACTGATGAGGAAGAGGCAAAGCAGAGGCAGTTGAAGGGCATATTAAACAAATTAACTCCTCAGAATTTTGAGAAGCTTTTTGATCAGGTTAGAGCAGTTAATATTGACAATGTAGTTACTCTCAATGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAGCCAACCTTCTGTGAAATGTATGCCAATTTCTGTTATCATCTGGCTGCTGCATTGCCCGATCTCAGTCAAGACAATGAAAAAATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAGGAAGAATTTGAAAGGGGCGAAAGAGAGGAAGAAGAAGCTAATAAGGCTGATGAAGGTGAGGTCAAGCTGTCTAATGAGGAAAGAGAAGAAAAAAGAACCAAGGCAAGACGACGTATGTTAGGTAATATCAGATTGATTGGAGAACTTTATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTATTGGGTCGGTATCAGGATCCAGATGAAGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCTAAAGCCAAAGAACATATTGATGTATATTTTGATAGGATGAGATCATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGCTGAAGGACGTAATTGATTTGAGAAAGAATAAATGGCAACAAAGAAGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTTCTCAAGAGAGGCTGGCCCAAGCTGGTAGGTTGGGTCGTGGCCCAGGCAACAATCCACCTAGAAGGATGCCTATGGATTTTGCTCCAAGAGGGTCATCTATGTTATCTCCTAATGCTCAGATGGGTGGACTACGAGGATTGCCTACTCAAGTTCGTGGGTATGGTTCTCAGGATGCTCGTATTGATGAAAGGCAAACTTATGAGACTAGGACATTGTCAGTTCCCTTACCACAAAGACCTTTAGGTGATGAATCAATAACCTTGGGACCAATGGGTGGTCTTGCCAGAGGAATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTCAACTGGTCTTAATGGTTATAATAATTTATCTGAGCGGACTTCATACAGCTCTAGGGATGATCCTGCATCAAGATATGCTCCAGATAGATTTTCTGGTTCTACGTATGATCAATCAAGTGTTCAAGATCATAATGTTAATTATGCGAACAGGGACATGAGAAATGCAAATAGGATTCCTGAAAAACCTGTTGTAACTTCACCACCTTCCAGAACGCAAGGGACAGCAGTCTCCCAGAATATTACCCAAGAACGATTGCAGGACATGTCCATGTTAGCTATCAGAGAATACTACAGTGCTAGAGATGTGAGTGAAGTTGTTCTGTGTATCAAAGATCTGAATTCTCCAAGCTTTCATGCTTCCATGGTTTCTCTCTGGGTCACAGACTCTTTCGAAAGAAAGGACACGGAGAGAGATCTTTTGGCCCAGTTGCTTGTCAAGCTTGTGAAATCTCAGGATGGACCCTTGGGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTCGGTACTTTGGAAGATGCGGTTAATGATGCCCCCAAAGCACCAGAGTTTCTTGGCCGTGTTTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAACGAGATTGGGCAGTTAATACATGAGGGTGGAGAGGAACCGGGGAGCCTATTAGAAGTTGGGCTTGCAGCAGATGTTATTGGAAGCACCTTGGAGGTAATAAAAATGGAGAAGGGTGATGCTGTTTTGAGTGAGATCTGTGCGAGCTCCAACTTGCGGTTGGAGACCTTCCGGCCGCCGGAACCTCTTACATCAAGGAAGTTAGAGAAATTTATTTAG 5448 0.4403 MSFNQPKSDKSDAVYRKSGRSASFNQQRGSSGGAYGRGGGGGAGPSPSLSSNRSFNKKSNNNAQGGQSRVNPTLVNSAESNSTYAARTVPNGSHVQPQLHGGSDAPVTNATAKPFESSAVQRSTRAVPKAPTSQPPSMSSDPAAPTTPAKDASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQARHDSFRPAPSVPTPPVPKQQAVKKDTGVTDQSNAGETHTATRAKKDTQASPLPPASQMQKPSVIPLTGISMPMPYHQSQASVHFGGPNPQIQSQGMSSAPLQIPLPMPLPIGSATQVQQPVFVPNLQPHPIHPQGIMHQSQNMGFTPQIGPQLSHQLGNMGIGISPQYPPQQGGKFTGPRKTTPVKITHPETHEELRLDKRADAYSDGGSSGVRPHSGMASQSQPAQQFAASHPINYYPSSSYGTNSLFYPTASSLPLTSSQIAPNSQPPRFNYAVSHGPQNVSFVNSSSHTSLPVNKAGTPIPGTAEPPNPEFSRDVHNAILSAPSGVTSVSIKPSGGSGAADSFANSSTQKSVSPSSSLTSGDALSSAPLKGSEIAEISSQQSKISTDSSVLSSFPNLSAAKPASASLVLSTSAVSEDSVSAIPNNEGRKNESVSRSNSLKDNQKKIQKKAQSQHQVAVQSPAVVNVPSQAVDGGIPDEVSESVGAKTNHSAVITSENLSAAASGLLSATSGSIPYAVEMKSDTTQVPVRASAQGPLIGVDDFNNHKIAELDELSQQDKLLQPNIMELTGKTENLSLEGCNQNVSEAGTELKQTKDGAVKLSTEVGALRSVQLGQDESASSSAGCDGTADNTKDVSLIRNDSVMSNEAVATNSGTSDQQSADILETSSKHLKDGSDSTGSVAVSLPASGTKDKPVSEPSKVKPTSKGKKKRKEILLKADAAGSTSDLYNAYKGPEEKKESVISAEKTEIDSASGNLEQLPSDAVQSDAVANKQSKQSKAELDDWEDAADMSTPKLEVSDETEQVSEGSAVTAKKYSRDFLFKFAEQFTDLPEGFEITADIAEVLINPNFSSHVIERDSPSTGRIIDRSGSMSRRGSGIIEEDKWNKASNAFHSGMRLDGVGGNAGFRPGQGGNFGVLRNPRTQTPMQYAGGILSGPMQSMVNQGGMQRNSPDGERWQRATNFQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFDQVRAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCYHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKLSNEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGRYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHIDVYFDRMRSLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERLAQAGRLGRGPGNNPPRRMPMDFAPRGSSMLSPNAQMGGLRGLPTQVRGYGSQDARIDERQTYETRTLSVPLPQRPLGDESITLGPMGGLARGMSIRGPPAVSSSTGLNGYNNLSERTSYSSRDDPASRYAPDRFSGSTYDQSSVQDHNVNYANRDMRNANRIPEKPVVTSPPSRTQGTAVSQNITQERLQDMSMLAIREYYSARDVSEVVLCIKDLNSPSFHASMVSLWVTDSFERKDTERDLLAQLLVKLVKSQDGPLGQAQLIKGFESVLGTLEDAVNDAPKAPEFLGRVFAKAITEHVVSLNEIGQLIHEGGEEPGSLLEVGLAADVIGSTLEVIKMEKGDAVLSEICASSNLRLETFRPPEPLTSRKLEKFI* 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00272 1815 SUPERFAMILY ARM repeat 1622 1812 IPR016024 -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 947 969 - -
Lapu6g00272 1815 FunFam Eukaryotic translation initiation factor 4G 1621 1814 - -
Lapu6g00272 1815 Pfam MIF4G domain 1192 1414 IPR003890 GO:0003723|GO:0005515
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 807 831 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 1440 1460 - -
Lapu6g00272 1815 FunFam Eukaryotic translation initiation factor 4G 1192 1427 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 947 997 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 611 635 - -
Lapu6g00272 1815 Coils Coil 1274 1294 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 395 420 - -
Lapu6g00272 1815 SUPERFAMILY ARM repeat 1186 1416 IPR016024 -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 1529 1585 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 525 561 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 919 938 - -
Lapu6g00272 1815 Pfam MA3 domain 1633 1740 IPR003891 -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 806 831 - -
Lapu6g00272 1815 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 352 1815 IPR045208 GO:0003743
Lapu6g00272 1815 Gene3D - 1619 1815 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 1537 1563 - -
Lapu6g00272 1815 SMART if4_15 1192 1414 IPR003890 GO:0003723|GO:0005515
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 18 32 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 1284 1311 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 863 910 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 478 508 - -
Lapu6g00272 1815 SMART ma3_7 1628 1742 IPR003891 -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 45 146 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 970 995 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 216 252 - -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 611 653 - -
Lapu6g00272 1815 Gene3D - 1192 1427 - -
Lapu6g00272 1815 ProSiteProfiles MI domain profile. 1627 1751 IPR003891 -
Lapu6g00272 1815 MobiDBLite consensus disorder prediction 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00272 Lapu-Chr6 2395392 2404291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00272 1 1814 Eukaryotic Initiation Factors Gene Family AT3G60240 45.416 0.0 1284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00272 K03260 - gmx:100796636 2905.55