Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00257 ATGGCCGCCGTCGCTGCCACCACATCATACTTCTTCGGCACCCATCTCAGCAGCCCTATAACCTTAAACACCGGAAGATTCCGCGCGTTCTTCAACTTCGGCACCAAGAAGGCGCCGCCGCCGCCGCCGAAGAAAAAGGAAGTGAAAGTGAAACCCGTCTCCGGCGACCGGCTGGTGTGGTTCCCGAATGCGGAGCCGCCGGAGTGGCTTGACGGCAGCATGATCGGCGACCGCGGGTTCGACCCATTCGGGTTCGCAAAGCCCGCGGAGTACCTGCAGTTCGACCTGGACTCCCTGGACCAGAACCTCGCGAAGAACGTCGCCGGCGACGTGATCGGAACCAGGGTAGAGGTGGCAGAGGTTAAACCGACGCCGTTTCAGCCCTACACGGAGGTTTTCGGGATTCAGAGGTTCCGCGAGTGCGAAGTCATTCATGGAAGGTGGGCAATGCTGGGTGCTCTCGGTGCTTTGGCCGTTGAGGCTCTCACCGGAGTCGCATGGCAAGACGCCGGAAAGGTAGAGCTGGTGGAAGGATCATCGTACTTGGGACTTCCACTTCCATTTTCATTGAGCACACTGATATGGATCGAGGTGATAGTGATAGGATACATAGAGTTTCAGAGAAATGCAGAACTTGACCCAGAGAAAAGGCTGTACCCAGGAGGCAAGTTCTTCGATCCTCTGGGTTTGGCAGACGACCCTGAAGAAAAAGCCAGACTTCAACTTGCAGAGGTCAAGCATTCCCGCTTGGCCATGGTGGTCTTCCTCATCTTTGCCATTCAAGCTGCTGTAACAGGAAAAGGCCCTATCAGTTTTATTGCTACCTTCAACAAGTGA 837 0.5556 MAAVAATTSYFFGTHLSSPITLNTGRFRAFFNFGTKKAPPPPPKKKEVKVKPVSGDRLVWFPNAEPPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNVAGDVIGTRVEVAEVKPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLSTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLADDPEEKARLQLAEVKHSRLAMVVFLIFAIQAAVTGKGPISFIATFNK* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00257 278 Pfam Chlorophyll A-B binding protein 66 262 IPR022796 -
Lapu6g00257 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 32 274 IPR001344 GO:0009765|GO:0016020
Lapu6g00257 278 Gene3D Chlorophyll a/b binding protein domain 59 278 - -
Lapu6g00257 278 SUPERFAMILY Chlorophyll a-b binding protein 56 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00257 Lapu-Chr6 2204019 2206593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00257 12 275 Chloroplast and Mitochondria Gene Families AT3G08940 72.348 3.35e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00257 K08915 - gmx:100820335 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00257 6 2204019 2206593 Lapu6g00257 6 2204019 2206593 ECH