Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00252 ATGGAAGATCAATACTTAAAACGACGCGTAACTACAGGATGTTACGACGTAGACGTGTCAAATGGCAATGACATATGGAAAAGTGAAAATGTCCTATTCTTTTACCTTCCTAGCTTGGCTGCCCAAGTTGCTTTCATGTTGTTATCCACTCGTATTTTGTACTACATCCTCAAACCCTTAAACCAACCACGTCTTGTTTCTGAGATTTTGATGGGTATTTTGATAAGTCCAGAACTATTTGGATCATCAGCTTTATCTGATGTTCTCACCCCTTTGAAGTCAATCCTAACAACTGAAACCATATCATACGTGGGACTCATTTACACCGTGTTCCTGGCTGGCTTGGACATGAATTTTGACACAATCCTACGAGGAAGAAAGAAGGCCACAAGCATTGCCGTTGCTGGCGTTTTGATTCCAATGTTATGTGGGGGTTTCATATATGCTTTGGCTCTAAAGATGTTCAAGGGACCTTCAGAGTATTGGGCAAATTTCAACACGCCTAAGGCATATATGTTTTGGACCTTAGTTTTGAGTGTCACAGGTTTTCCTATGGTTAGTCACATCCTTGCAGATCTCAAGCTCCTCTATACAGGACTTGGCAGAGTGGCCTTAACAACAGCCATGATCAGTGACTTCTATAATTGGGTCATGTTTGCACTGTTGGTTCCATTTGCCATACACGGTGGAAGGGCCATCTACTCGGTGGTGAGCACTCTAGGTTATGTGCTTTTCTGCTTCATTCTTATACGTCCTTATTTGGTGGAGATAATAGTGCGAAAAACCAATAAAAATGAGTGGGACAATAACGGGTTGTTCTTTGTGGTCATGGGAGCATATACTTCTGCAGCGGTCACGGATCTCTTAGGGACACACCCTGTTGTCGGGGCTCTGGTGTATGGAATAATTATACCTCGTGGTAAATTTACTCACTTGCTCATAGAGAAGTCAGAGGATTTTGGGGTTGTTTATCTGGCTCCATTGTTCTTTGGTAGCTGTGGCATAAGGCTCAGAGCAATATATGTCATAAAAACTCAAGGTTTGGGCCTGGTGCTGTTGATTTTGCTCCTCTCATTCCTCCCAAAGATTTTAAGCACTGTAATAGCCACTCAGTTTTATGGTATGTCTGTTCTTGATGGTGTGTCTATTGGACTGCTCTTGAACACCAAGGGCGTCCTACCAATATTAATGCTCAACAGTGCCGTTGATAAGCAGATTTTGAGTGTGGAGTCCTTCTCAATTTTGACAATAGCTGTTCTAATAATGACCATGCTGGTGCCTCTTATCATCAATGCTATATACAAGCCAAGAAAGCTATACAAACAAAATAAACTTAAGACCATACAAAACTTGAAGGCCGAAGTAGAGCTGCGAATATTAGCTTGTGTCCACAACCCTCGGCAAGCCACAGGAATGATCAACATCCTTGAAGCATGCCACACCACAAAACTCTCCCCTCTACGCGTGTTTGCGCTTCAGCTTGTTGAACTAAGTGGAAACACCACTTCCCTTTTGGCTTCCCATATCAATCAGCACAACCAACAGCAAAGTGGTGGTTCAAAAGCCCTCACCAAAGCACAGGAAGACTTGGAGAACATCACAAACATTTTCCAAACGTACGCAGCTGTAAATGAGCACAGTAACGTGGATATCATTGCAGCTGCATCCACCTATTCAACCATTCACGACGACATATACAACCTGGCGCAGGAGAAACAGGCAAACCTGGTTCTCCTTCCTTTCCACAAACAATCAAACATAGAAGGCATTCTAGAGATAGCCAACACTGCATTCCAAGAAATAAACCGCAATGTGATGAGAGATGCACCATGTACTGTGGGAATCTTTGTTGATCGTGGACTTGGGTCATTGTTCAAAGTGAACTTGCGTGTGGTTATGGTTTTTATTGGTGGTCCTGATGACCGTGAATCCTTGGCTGTTGCATGGAGGATGTCAAAGCATCAACGGGTGCAACTATCTGTTGTGAGGATCCTTATGTTTGGTGAGGCCGCAGAAGTTGATGTTTTGTCCCATGTTGAGTCTAATGGACTGTTATCTGTGGTACTAGACAGTGAGAAGCAAAAGGAGTTGGATGATGAGTACGTGAGTGCATTTAGACTTAAAGCAGTGAGCAATGAGGATTCAATAAAGTATTCAGAGAAAGAAGTTCGTTGTCGTGATGATATTGTAGAAGTGCTTAATGAGGTTGACCAAATTGGTTATGATTTGTATATTTTAGGAGAAGGGGCAGGTAGGAACTGTTTGATATTGTCGGAGTTGATGAAATGGACTGATTGTCCGGAACTTGGTGTCATAGGGGACATTGTGGCATCGAATAATTTTGGTTCAAGCTCTTCAGTGCTTATTATACAGCAATATGGGTTTGGGGGAATGGTGTTTGAGAACAGTAATACCACACAGTGTCCAAGGGAAGAAGTGCCTTCAAACATTGAAGATTCTGGGGCAGTTTCTGTGAAGGTAGAATAG 2487 0.427 MEDQYLKRRVTTGCYDVDVSNGNDIWKSENVLFFYLPSLAAQVAFMLLSTRILYYILKPLNQPRLVSEILMGILISPELFGSSALSDVLTPLKSILTTETISYVGLIYTVFLAGLDMNFDTILRGRKKATSIAVAGVLIPMLCGGFIYALALKMFKGPSEYWANFNTPKAYMFWTLVLSVTGFPMVSHILADLKLLYTGLGRVALTTAMISDFYNWVMFALLVPFAIHGGRAIYSVVSTLGYVLFCFILIRPYLVEIIVRKTNKNEWDNNGLFFVVMGAYTSAAVTDLLGTHPVVGALVYGIIIPRGKFTHLLIEKSEDFGVVYLAPLFFGSCGIRLRAIYVIKTQGLGLVLLILLLSFLPKILSTVIATQFYGMSVLDGVSIGLLLNTKGVLPILMLNSAVDKQILSVESFSILTIAVLIMTMLVPLIINAIYKPRKLYKQNKLKTIQNLKAEVELRILACVHNPRQATGMINILEACHTTKLSPLRVFALQLVELSGNTTSLLASHINQHNQQQSGGSKALTKAQEDLENITNIFQTYAAVNEHSNVDIIAAASTYSTIHDDIYNLAQEKQANLVLLPFHKQSNIEGILEIANTAFQEINRNVMRDAPCTVGIFVDRGLGSLFKVNLRVVMVFIGGPDDRESLAVAWRMSKHQRVQLSVVRILMFGEAAEVDVLSHVESNGLLSVVLDSEKQKELDDEYVSAFRLKAVSNEDSIKYSEKEVRCRDDIVEVLNEVDQIGYDLYILGEGAGRNCLILSELMKWTDCPELGVIGDIVASNNFGSSSSVLIIQQYGFGGMVFENSNTTQCPREEVPSNIEDSGAVSVKVE* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00252 828 PANTHER CATION/H + ANTIPORTER 20 793 - -
Lapu6g00252 828 Pfam Sodium/hydrogen exchanger family 46 433 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu6g00252 828 Gene3D - 38 443 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00252 Lapu-Chr6 2150194 2153444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00252 14 793 Antiporter Super Family AT2G13620 36.181 1.53e-173 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00252 - - vun:114191181 1426.38