Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00241 ATGGCGAATTCAGGAGCATCCCCTGTCCATAGTTTTGCTTCGGTAGTGGAATATGCTATTAGTAGTGTTGGAGGAGATTTGGGGGCATTTCCTTTGCATGATTTTGCTTTGGCATTGGAGAATGCGTGGAGTAGTATTGGAGGAGATTTCGGAGCATTACCTGTGCCAGGTTTTGCTTCGATAGTGGAGAATGCGATGAGAAGTACTAGAGGAGATTCGAGAGCATTACTCGTGCATGGTTTTGCTTCGGCCGTGGATAATGCGATGAGAAGTATTGGAGGAGATTTCGGAGCATTACCTGTGCATGGTTTTGCTTCGATAGTGGATAATGCTATCAGTAGCGTCAGTGGAGATTTGCGAATATCCCATTCCCCTGTGCATGGTCATCAATTATTCACCTTAGTTGAGCTTGTAGCAGCTACCAACAATTTCTCAGTTGACAACAGGATTCGTGTTGGAAGCTCTAGTATTGTGTACAGAGGCAAACTCGTGGATGGTAGTGAGGTTGCAGTAGAAAGGGTTGAAAGGTGGAGAAGTAGAACGCCTGAAGAGGCCTTCTGGTGGAGGAGAATGCGTAATTTGAGGTTTTTGCCGGGTTTACGCCCCAAGAACTTGGTTGGGATGGTTGGGTTGTGTGAAGAGAGGGATGAGAGGATGTTGGTGTATGAGGGCATGAAGAATGGGTCGTTGTATGATCATTTACATGAGAAGGGCAGCAATGTGTTGAATTCGTGGAAAATGAGGATAAAAATTGCTTTGGATGCTTCCAGAGGAATAGAATATCTTCACAAGTATGGAGTTCCATCTTGTGTTCATGGAGATATAAAGGCTTCCAACATTCTTCTTGATGCTATCTGGACGGCAAAGGTATCGAACTTTGGGAAGGCAGCAGGAAGCATTGGGTACATTGATCCTGAGTACTTAACTGGACGTGTGTTGACAGAAAAGAGTGATGTGTATGGGTTTGGGGTGGTTCTGCTTGAACTTCTAACGGGAAAGAGAGCTACATATTGGGAAGAGGGAGGCACCATATTCCATGTGATACCCTTTGCAGAGGCTGCTATTTTGGGTGGAGATTTTGCTAAAATTTTGGATACAAGGGTTGGAGAACCCCGTCTAAACGAAACAAAGGCAGTGAAGTTATTGGCCGATACTGCCATCACTTGTGTAAATAAGGAAGCAAAGGTTAGACCAACCATTGCTGACGTTGTGGTCAATTTGGCGAGAGCTCTCCGTTATTTACCGTACTAG 1251 0.4492 MANSGASPVHSFASVVEYAISSVGGDLGAFPLHDFALALENAWSSIGGDFGALPVPGFASIVENAMRSTRGDSRALLVHGFASAVDNAMRSIGGDFGALPVHGFASIVDNAISSVSGDLRISHSPVHGHQLFTLVELVAATNNFSVDNRIRVGSSSIVYRGKLVDGSEVAVERVERWRSRTPEEAFWWRRMRNLRFLPGLRPKNLVGMVGLCEERDERMLVYEGMKNGSLYDHLHEKGSNVLNSWKMRIKIALDASRGIEYLHKYGVPSCVHGDIKASNILLDAIWTAKVSNFGKAAGSIGYIDPEYLTGRVLTEKSDVYGFGVVLLELLTGKRATYWEEGGTIFHVIPFAEAAILGGDFAKILDTRVGEPRLNETKAVKLLADTAITCVNKEAKVRPTIADVVVNLARALRYLPY* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00241 416 ProSiteProfiles Protein kinase domain profile. 144 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00241 416 Gene3D Phosphorylase Kinase; domain 1 113 223 - -
Lapu6g00241 416 Pfam Protein tyrosine and serine/threonine kinase 148 406 IPR001245 GO:0004672|GO:0006468
Lapu6g00241 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Lapu6g00241 416 SMART serkin_6 144 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00241 416 SUPERFAMILY Protein kinase-like (PK-like) 121 406 IPR011009 -
Lapu6g00241 416 Gene3D Transferase(Phosphotransferase) domain 1 225 413 - -
Lapu6g00241 416 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 120 412 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00241 Lapu-Chr6 2046477 2047801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00241 132 411 Receptor kinase-like Gene Family AT3G55950 52.063 2.38e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lapu6g00241 PK_Tyr_Ser-Thr 1.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00241 - - pvu:PHAVU_001G243700g 630.557