Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00240 ATGAAAACACCACCTTTCTCCTCCGTTACCCTCTGTCTCGGCGTCGCCGTCCTGCTTGTACTTTCTCTGCCACGTTCATCCCATGGCCTCGGCTCCGGCGCCACCCTTGCCATATCTGACGCCTCAGCCACCGTGTGCGCCGTCGTGGCGGGCGAGTCCACGCGCCGCATTGAGTGTTACCGTCAGGGGCAGAATGTCTCCATCACTCCCAACGTAAATTTTTCAACGATTTCTGGTGGGAGGAACTACTTCTGTGGTCTAAGGTCTAGTAACTCCGATTTATATTGTTGGAACACAAGCTCTTCCTTCGAAAGGAGAAGGCTTTACAACGATAGTTCTGTTCCATTGGAGAATCTAGCCGTTGGGGGTACCCACGTTTGCGCCACCGTGGTGGGCGGTGGCACGGTGAAGTGCTGGAGAACTGGCGACACGTTTCTTCTTCCTTCTGATACTGATCAGTTCACTTCGATTTCATCTGGGTCTGGCTTCTCTTGCGGAATTTTGAAGAATGGTTCTCGGGTTCGATGCTGGGGAGATACCAGCCTTTCGGATTTAACGGAACGGATTGAGAATGCATTTGGAAACATGTCCATGTTGAGTCTTGTCGCAGGTGGTTCACATGTTTGTGGATTGAACTCCACTGGGTTTTTGGTATGTGGAGGAAATAATGATTCTGGACAACGTGATCTTCCTCAAGGTGGGGCTTTTGAGTATTCTGGTTTGGCGCTTGGAGCTGAACATGGTTGTGCTATAAGAAGACTGAATGGTTCGGTTGTGTGTTGGGGTGGCAATGGGGGATTCTCGGTGAATAATGTCACTGAAGGAGTTTCCTTTGAGGTAATTGTTTCTGGGTCTAATTTTGTTTGTGGATTGAGAACAAACAATTTGACAGTGGTGTGTTGGGGTCCTGGTTGGTCTAATAGTTCGACGTTTGAGCTTCCTTTTTCAACTGTTCTTCCAGGGTCTTGTGTTCAATCTACTTGTGGAGAGTGTGGTTCATATCTTGATTCTCAATCTCTATGCTCTGGCTCTGGTAACATTTGTAAGCCGATGACTTGTAAGCCTCAAACAACGGCTCCACCACCGCCATCACCGTCACCGCCTCCACCATCAATGCCACCGCCGCTGCCATCACCGCCACCACCGTCGTCATCACGATCAAAGACCTTGACAAACGGGTTACTGGCATTTGCTATTATCGGTTCTGTAGGAGCTTTTGCTGGAATATGCACTATAGCTTATTGCTTATGGAGTGGAGTTTGTTTTGGGAAGAAGAAAGTCCACAATTCTGTGCAGCCTACAATCACAAGAGGTAGCAGTGGTTCAAATGGTGGGGGTGCTTCTAATAATAGCAATTCTTCAATATCGTCTATGATTATGCGTCAGACTTCAATAATAATGAGGCGCCAGAGGAGTGGAACCTCATCAACAAAGCACCCAGACAGGGCTGAGGAGTTCACCCTGGCTGAGCTTGTGGCAGCCACCAACAATTTCTCACTTGAAAACAAGATTGGAGCTGGAAGCTTTGGTGTTGTGTACAAAGGCAAACTCGCGGATGGACGCGAGGTGGCAATCAAGAGGGGTGAAACTGGTTCCAAGATGAAGAAGTTTCAAGAGAAGGAGAGTGCATTTGAGTCTGAATTGGCCTTCTTGTCTCGCCTACACCACAAGCACTTGGTTGGACTGGTTGGGTTCTGCGAAGAGAAAGATGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGAGCGCTGTATGATCATTTGCATGACAAGAACAATGTGGAGAAGGGTAGCAGTGTGTTGAATTATTGGAAAATGAGGATCAAAATTGCTTTGGATGCTGCCCGGGGAATAGAATATCTTCATAATTATGCAGTTCCATCAATTATTCACAGAGACATAAAGTCTTCTAACATTCTTATTGATGCTACTTGGACGGCAAGAGTATCAGATTTTGGATTGTCTTTGATGAGTCCAGAACCTGACCGTGATTACCGACCAATGAAGGCAGCAGGCACCGTTGGATACATTGATCCCGAGTACTATGGTTTAAATGTATTGACGGCAAAGAGTGATGTGTATGGGCTTGGAGTTGTACTGCTTGAACTTTTAACAGGAAAGAGAGCTATATTCAAGTATGGCGAAGATGGAGGAAGTCCACTAAGTGTGGTGGACTTTGCAGTGCCTCCTGTTTTGGCTGGAGAGTTGGTGAAAATTTTGGATCCAAGGGTTGGAGCGCCCGATGTGAATGAGGCGGAGGCAGTGGAATTAGTGGCCTATACAGCCATCCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACCATGGCTGACATTGTGGTTAATTTGGAGAGGGCTCTGGCTATTTGTGAGAGTAGCCATGATAGCGTTTCCAGTGGTTCTATCTCTATTGTTTCAGAATGA 2424 0.4703 MKTPPFSSVTLCLGVAVLLVLSLPRSSHGLGSGATLAISDASATVCAVVAGESTRRIECYRQGQNVSITPNVNFSTISGGRNYFCGLRSSNSDLYCWNTSSSFERRRLYNDSSVPLENLAVGGTHVCATVVGGGTVKCWRTGDTFLLPSDTDQFTSISSGSGFSCGILKNGSRVRCWGDTSLSDLTERIENAFGNMSMLSLVAGGSHVCGLNSTGFLVCGGNNDSGQRDLPQGGAFEYSGLALGAEHGCAIRRLNGSVVCWGGNGGFSVNNVTEGVSFEVIVSGSNFVCGLRTNNLTVVCWGPGWSNSSTFELPFSTVLPGSCVQSTCGECGSYLDSQSLCSGSGNICKPMTCKPQTTAPPPPSPSPPPPSMPPPLPSPPPPSSSRSKTLTNGLLAFAIIGSVGAFAGICTIAYCLWSGVCFGKKKVHNSVQPTITRGSSGSNGGGASNNSNSSISSMIMRQTSIIMRRQRSGTSSTKHPDRAEEFTLAELVAATNNFSLENKIGAGSFGVVYKGKLADGREVAIKRGETGSKMKKFQEKESAFESELAFLSRLHHKHLVGLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVEKGSSVLNYWKMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPEPDRDYRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKYGEDGGSPLSVVDFAVPPVLAGELVKILDPRVGAPDVNEAEAVELVAYTAIHCVNLEGKDRPTMADIVVNLERALAICESSHDSVSSGSISIVSE* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00240 807 Pfam Protein kinase domain 499 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00240 807 SUPERFAMILY RCC1/BLIP-II 32 267 IPR009091 -
Lapu6g00240 807 SMART serkin_6 498 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00240 807 Gene3D - 26 150 IPR009091 -
Lapu6g00240 807 Gene3D - 151 348 IPR009091 -
Lapu6g00240 807 FunFam Serine/threonine-protein kinase-like protein CCR4 579 801 - -
Lapu6g00240 807 Gene3D Phosphorylase Kinase; domain 1 458 578 - -
Lapu6g00240 807 Gene3D Transferase(Phosphotransferase) domain 1 579 800 - -
Lapu6g00240 807 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Lapu6g00240 807 ProSiteProfiles Protein kinase domain profile. 498 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00240 807 FunFam serine/threonine-protein kinase-like protein CCR1 467 578 - -
Lapu6g00240 807 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 195 794 IPR044815 GO:0004674
Lapu6g00240 807 MobiDBLite consensus disorder prediction 434 454 - -
Lapu6g00240 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Lapu6g00240 807 MobiDBLite consensus disorder prediction 355 384 - -
Lapu6g00240 807 MobiDBLite consensus disorder prediction 355 387 - -
Lapu6g00240 807 SUPERFAMILY Protein kinase-like (PK-like) 475 783 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00240 Lapu-Chr6 2039453 2041876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00240 8 807 Receptor kinase-like Gene Family AT3G55950 59.146 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lapu6g00240 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00240 - - vra:106757659 1390.17