Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00229 ATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCATGTGCAGCTTGCAAGTTATTGAAGAGAAGATGCGTACCTAATTGTATTTTTGCACCTTACTTTAGGTCTGATGAGTGCAAGAAGTTTGCCAAGGTGCACAAGGTATTTGGAGCCAGCAATGTGAGCAAGATCTTGATTGAAGTGTCAGAAGAGCAGAGAGAGGACACAGTGAATTCTCTGGCATATGAGGCTGAGGCAAGGCTGAGAGACCCCGTTTATGGATGCATTGGTGCCATAGCTCTCTTGCAAAGGAAGATGGTTGAGCTTCAACATGATCTGGCCATTGCTAAGGATCGTCTTGCGCGTTGTCACGCTGCTGCTACTGTTCTCCCTTCTCCTGATATCTTGCATGCCCATGTTAGCCTGCCTCCATTCCCTGACTTTTGCTCTTCTTCCAATGATTTCAATGATATCTTCTGCCACACCTCATCATCTCAATTATTGAGCCGCCATGAAACGGTGGATGATTTCAATCAAATCCCATATATATTTTAA 528 0.4489 MKGYEPRSSSSCAACKLLKRRCVPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVSEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARCHAAATVLPSPDILHAHVSLPPFPDFCSSSNDFNDIFCHTSSSQLLSRHETVDDFNQIPYIF* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00229 175 Coils Coil 90 110 - -
Lapu6g00229 175 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lapu6g00229 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 130 - -
Lapu6g00229 175 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00229 Lapu-Chr6 1922908 1923909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00229 1 111 AS2 family AT3G11090 80.180 5.54e-63 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu6g00229 LOB 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00229 - - gmx:100791250 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00229 6 1922908 1923909 Lapu6g00229 6 1922908 1923909 ECH