Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00228 ATGGTGCGTGTGAAAGAGGCTCATGTTGTCACACCGTCAGACCCCACACCCAACACCGTCCTCGCACTCTCACCACTCGACTCACAACTCTTCTTGCGCTTCACAATCGAGTATCTCCTTGTTTACAGGCCCGCCCCGGGCCTCGACCGGGCTTCCACCGCCACTCGTTTAAAAACCGCATTAGCTAAAGCGCTCGTTCCTTATTATCCATTTGCTGGAAGAGTCCGGCCCCAGCCCCAAGGACTGGGCCTCGAGGTGGTGTGTCGGGCCCAGGGCGCTGTCTTCATCGAAGCCTCTTCCGAACGTTACAGTGTGAACGATTTCCAAAAGGCCCCCAAAACAGTCGCCCAATGGAGAAAGCTCTTGTCCCTCTACGTCACCGACGTCCTCAAAGGCTCGCCGATTCTCGTCGTCCAGCTGACATGGCTCGCCGACGGAGCGGCCGCCGTCGGCGTCGGAATCAACCACTGTATCTGCGACGGCATCGGCAGCGCAGAGTTTCTGAATTATTTCTCCGATTTAGCCTCGGAGAAATGTGTGAGTCTGGGTCTCGGTGTTAGTGTGGATCCGAAACCGAAACCGGTTTGGGATCGACATCTTCTGAATCCGGAGAATAGAAGTGAGGCGAATCCAGCGATGCATGCTGAGTTTGGAAGAGTTCCTGATCTCTGCGGGTTCATGAACCGTGTGACAAGCAGGTTGAAACCTACTTGCATTGTGTTGGACGAGAGACGCATCGAGTCGCTGAAGCGCGCGTGCGGAGGAGCGTCGTGCACGTCGTTCGAGGTAGTGGCGGCGCACGTGTGGAGGAGCTGGGCTCGGGCGTTGGGGTTTCCGAAGAACCAGACGCTGAAGCTTTTGTTCAGCGTGAACGTCCGGAAGCGCGTGAAGCCATGTTTGCCGGAGGGGTACTATGGGAACGCGTTTGTGTTGGGGTGCGCGCAGAGCAGCGCGTGGGAGTTGGGGGAGAGGGGGGTGTCTTACGCATGGGGTGTGGTGAAGCGTGCGAAGGAGAGGGTGGACAGCGAGCACGTGCGGAGGGTTGTTGAGTTGGTGTCCGAGTCGAGGGCGAGTCCTGACTCGGTGGGGGTGCTGATACTGTCGCAGTGGTCGAGGCTGGGTTTGGAGGGGATTGAACTCGGAATGGGAAAGCCTCTGCATGTGGGTTCCATTTGCTGCGATAGATACTGTTTGTTTCTTCCGGTGACCGGTGAACGCCACAGTGTGAAGGTGATGGTGGCTGTCCCCAGCGGCTCCGTTGACAATTTTCATCGCTTCCTCCGGGAATCCAATTCATGA 1299 0.5735 MVRVKEAHVVTPSDPTPNTVLALSPLDSQLFLRFTIEYLLVYRPAPGLDRASTATRLKTALAKALVPYYPFAGRVRPQPQGLGLEVVCRAQGAVFIEASSERYSVNDFQKAPKTVAQWRKLLSLYVTDVLKGSPILVVQLTWLADGAAAVGVGINHCICDGIGSAEFLNYFSDLASEKCVSLGLGVSVDPKPKPVWDRHLLNPENRSEANPAMHAEFGRVPDLCGFMNRVTSRLKPTCIVLDERRIESLKRACGGASCTSFEVVAAHVWRSWARALGFPKNQTLKLLFSVNVRKRVKPCLPEGYYGNAFVLGCAQSSAWELGERGVSYAWGVVKRAKERVDSEHVRRVVELVSESRASPDSVGVLILSQWSRLGLEGIELGMGKPLHVGSICCDRYCLFLPVTGERHSVKVMVAVPSGSVDNFHRFLRESNS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00228 432 Pfam Transferase family 1 424 - -
Lapu6g00228 432 Gene3D - 228 429 IPR023213 -
Lapu6g00228 432 Gene3D - 1 218 IPR023213 -
Lapu6g00228 432 PANTHER ACYL TRANSFERASE 4 2 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00228 Lapu-Chr6 1914988 1916530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00228 2 429 Monolignol Biosynthesis Gene Families AT5G48930 28.444 2.87e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00228 - - pvu:PHAVU_001G244800g 795.038