Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00198 ATGTCTCCACCCGTCGGAGTCAGCGTCCCACTATTGGGACAATCCAACGGAGCGCCGCCGCCGGCGTCCGTCCCTGGCGCAGTGTTCAACGTGGCAACAAGTATAGTCGGCGCCGGAATCATGTCAATTCCGGCGATCATGAAGGTTCTCGGCGTGGTTCCCGCTTGCGCCATGATTATCGTGGTGGCTGTGCTCGCGGAACTCTCCGTTGAGTTTCTCATGCGCTTCACGCACTCCGGTGAAACGACGACGTACGCCGGCGTCATGAGGGAAGCGTTCGGGTCGCCTGGAGCTTTGGTCGCGCAAGCTTGCGTCGTCATCACCAACGTTGGGGGCTTAATTCTCTACCTTATCATCATCGGTGATGTGCTGTCTGGAAAGCAAGATGGAGGTGAAGTGCATTTGGGTATTCTGCAACAGTGGTTCGGAGTTCATTGGTGGAATTCCCGGGAATTTGCTCTTCTCTTCACTTTGGTCTTCGTCATGTTTCCATTGGTATTATACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTTTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGATTGGCTATTTTTGCACTGGTGCAAGGAAAAACGCAAACTCCTAGATTGTTTCCTCGGTTGGACTACCAAACCTCATTCTTTGATCTATTTACTGCAGTTCCTGTTGTTGTCACAGCCTTCACATTTCATTTTAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGCCATCTCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACATTACAGTAGGCCTATTTGGGTACCTATTATTTGGGGATTCAACACAATCGGACATTCTCATCAATTTTGACCAGAGTGATGATTCTGTGGTTGGTTCCTTGTTCAATAGTTTGGTCCGTGTAAGCTATGCACTCCACATCATGCTGGTGTTTCCTCTCTTGAACTTCTCTTTGAGATCCAACATAGATGAAGTTCTCTTCCCCAATAAGCCCATGCTAGCCACAGACAACAAAAGATTCATGATCCTCACTATGGTGCTGCTTGTATTTTCCTACCTTGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTTGGATCGTCATCCGCAGTGTGCCTTGCCTTCATTTTCCCGGGGTCTATTGTTTTACGGGATGCATATGGTATATCAACGAAAAGGGACAAAATTCTCGCACTGATAATGATTATACTAGCTGTAGTGACAAGTGTGCTTGCCATTTCCACCAACATATATAATGCTTTTAGTAGCAAGTCATAA 1311 0.4645 MSPPVGVSVPLLGQSNGAPPPASVPGAVFNVATSIVGAGIMSIPAIMKVLGVVPACAMIIVVAVLAELSVEFLMRFTHSGETTTYAGVMREAFGSPGALVAQACVVITNVGGLILYLIIIGDVLSGKQDGGEVHLGILQQWFGVHWWNSREFALLFTLVFVMFPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAIFALVQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSQMTTAVRLALLLCAVIYITVGLFGYLLFGDSTQSDILINFDQSDDSVVGSLFNSLVRVSYALHIMLVFPLLNFSLRSNIDEVLFPNKPMLATDNKRFMILTMVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDAYGISTKRDKILALIMIILAVVTSVLAISTNIYNAFSSKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00198 436 PANTHER AMINO ACID TRANSPORTER 18 419 - -
Lapu6g00198 436 Pfam Transmembrane amino acid transporter protein 22 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00198 Lapu-Chr6 1669322 1672263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00198 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.701 3.04e-178 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00198 - - gmx:100815694 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00198 6 1669322 1672263 Lapu6g00198 6 1669322 1672263 ECH
Lapu6g00198 6 1669322 1672263 Lapu6g00198 6 1669322 1672263 PCT