Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00174 ATGTGCAGGAACTCTAGTAATTCAGAGATGGTAGCTTCAAACAAAAGCACGTTAGAAGAGGTTTTGGACATTGAAAACAACATGGCTCAGTGGGTGCTGAATCCTCCAGATCCACCCTCCATGCTGCGTCAGGTCGTGGACAACGTCAAGGACATTCTTTTACCGCATCCACAACCAAACACATTCTCTTCTCTCAAGAACCAACCCTTTTCCAAACGCGCTTTTGCCTTCTTGCAGAACTTGTTTCCCATTCTTGCTTCATTCCAAAACTACAATGCCCAAAAGTTCAAGTGCGATTTCATGGCCGGCCTAACCCTTGCAATCTTCGCCATTCCTCAGTGTATGGGAAATGCAACATTGGCTCAGCTAAGTCCAGAATATGGCCTCTACACAGGAATTGTGCCCCCTATTATTTATGCTCTGCTAGCGAGTTCAAGGGAGATAGTGATTGGACCTGGATCTGTAGATTCACTGCTACTTTCCTCAATGATTCAGACATTGAAAGTTCCATTTGATGATTCTATTGCATACACTCAGCTTGTTTTCACTGTAACTTTTTTTGCGGGCATCTTTCAAGTTGCTTTCGGCCTCTTTAGGTTCGGTTTTCTGGTGGAATATATTTCCCAATCCACGATCGTAGGGTTCTTGGCAGCAGCTGCCGTGGGCATTGGACTACAACAATTGAAGGGATTATTTGGGATCGTTAATTTTACCAACAAAACTGCTTTAATTTCCGTGGTCAAATCGCTTTGGACATCCTTCAGAAACCAATCAGCGTGGCATCCCTACAACTTCGTTATTGGATTCTCATTTCTATGCTTCATCCTTTTTACCAGATTCCTGGGGAAAAGGAACAAGAAACTTATCTGGTTGTCACACATTGCTCCTCTCCTTTCTATCATTCTATCCTCTGTGATTGCTTACAAAATAAATGTTCACGAGCATCAAGTGAAGGACTACAGAGTTGAAGTGTTGGGACCAATTAAAGGAGGTAGGTCTTTGTCACGTACTGCTGTAAGCTTCAATGCTGGGTCAGAAACAATGGCATCGAACATAGTGATGGCACTGACGGTGCTCTTGTCACTTAAATTTTTGACAGGGCTTTTATATTTCACTCCGAAAGCAATCTTAGCAGCGATAATTCTTTCGGCTGTACCAGGACTGATTGACCTAAACAAAGCATGTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGTGCTGGAGCTTTCTTGGGAGTCTTGTTTGCTTCTGCGGAAATAGGGCTTGCAATTGGGATCACGATATCATTCGCGAAGATAATTCTAACCTCAATTCAACCAGCCATAGCGGTTATTGGAAGGCTTCCAGGAACCGATTCATTCGGCGATGTTCAACAGTATCCAATGGCACTCAACATTCCTGGAGTTTTCATCGTCTCTTTAAAATCTGCATGGCTTTGTTTTGCAAATGCAAATCTTGTGGAGGAAAGGATTGAGAGATGGGTGACCAATGAAAAAGCTAAGCATGGGAAAGGAGGAGAAAGCACCTTCCATCACGTCATCATTGATGCCTCAAGTCTTACGAATATTGACACCACCGGAATTGCTTCTCTGGTGGAGCTCAATAAAAATATGACTTCACGTGGAGTAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTTAGATTAGCTAACTTCGTGAGCAAAATTGGAGGAAGGGTTTTCCTTTCTGTGGGGGAAGCAGTGGATGCTTGTGTTGGCACTAAAATAGTTGCTTGTAGTCAATCAGTTTTCACGAGACAAAGTTCTCCCAAACACTTCAACATGGCTTCTTCAGCGATGGAAACCTGCAAATCAGAGGATTTACACATGCAGGTGGACATTGAGAAGAACGCACAGGATGTAAGGTCTCAGTGGGTTCTTAACGCTCCTGAGCCCCCAAGTCCATGGCGTGTGGTTGTAGATTCTGTTAGGAAAACCATCTCCCACTATAAACAAAAGTTTTCCTCTCTCACAGATCAACCCTGCACCACACTCCTCCTGTCAGTTCTGCAGGTTGTTTTTCCTATTCTTGCTTGGGGCAGAAACTACACTGCAACTAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATAGCTAGTCTCTGTATTCCCCAGAGCATTGGATATGCAACCTTGGCACATCTTGATCCTCAATATGGCCTTTACACAAGTGTGGTACCACCACTTGTATATGCTGTGATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTGGCAGTAGTTTCTTTGCTGTTATCCTCCATGATGGAGAAATTAGTAGACCCTGCTTCTGATCCAGTGGGTTATACAAAGCTAATTCTACTAGCTACTCTCTTGGCTGGCATCTTTCAGACTTCCTTCGGACTCTTCAGGCTGGGGTTCCTTGTGGATTTCCTATCGCATGCTGCAATAGTTGGATTTGTGGCAGGAGCAGCCATTGTGATTGGGCTTCAACAGTTGAAGGGACTCTTAGGAATCAGCCATTTTACGACCAAAACCGACATAGTCTCTGTCATCAAAGCTGTCTGGGAAGCAGTTCATAATCCCTGGAATCCTCGAAATTTTATCCTTGGATGCTCGTTCTTGGTCTTCATCCTAACAACGAGATTTCTGGGTAAAAAGAAGAAGAAACTGTTCTGGTTGGCATCAATTTCTCCTCTTGTATCTGTTATTTTGTCGACTCTATTTGTGTTTATTACAAGAGCTGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGAGGATTAAATCCCATCTCCATCCATCAGTTAGACTTCAACAGTCCCCACATAGGAGAAGTCGCCAAAATTGCACTAGTGGTTGCTGTCGTTGCCCTTACAGAATCTATAGCTGTTGGACGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGTTTGACAAACATCATAGGATCTTTCACCTCTTGCTACGTTGCAACTGGTTCGTTCTCCCGCACTGCTGTTAATTATGCAGCTGGGTGTGAAACTCTGGTGTCAAACATTGTGATGGCCATCACGGTCTTGGTATCACTGCAGTTTTTGACAAAGCTCTTGTATTACACTCCTATAGCTATTCTTTCTTCTGTGATACTATCCGCTCTCCCAGGACTTATTGACCTCAGTGAAGCTTACAAAATCTGGAAGGTTGATAAGATAGACTTTCTTGCTTGTGCTGGTGCCTTCTTCGGAGTTTTGTTTGCTTCCGTGGAGATTGGTCTGCTAGTCGCGGTGGTTATATCTTTCTCAAAGATCATTCTCATCTCAATTCGACCAGGCACAGAAACTCTAGGAAAACTTCCGGGAACTAATTTGTTCTGCGATGTCTATCAGTATCCCATGGCAGTCCAGATTCCTGGGGTTGTGATAATACGAGTCAAGTCTGCGTTGCTCTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGTATTTGTCAAATATAGTAAGTACTTATTTGGTGAACATTGACACCTCTGGCATTGCTGCTCTAGAGGAACTGCATAAGAGTTTGTCTTCACATGGAAAACAGTTAGCCATTGCGAACCCCAGGTGGCAAGTGATACACAAGCTAAAGGTGTCCAACTTTGTTGCCAAATTCGGTGGCAAAGTATTTCTGACTGTTGAAGAAGCTGTTGGCTGCAAGGGCCGGTGCTAA 3720 0.4336 MCRNSSNSEMVASNKSTLEEVLDIENNMAQWVLNPPDPPSMLRQVVDNVKDILLPHPQPNTFSSLKNQPFSKRAFAFLQNLFPILASFQNYNAQKFKCDFMAGLTLAIFAIPQCMGNATLAQLSPEYGLYTGIVPPIIYALLASSREIVIGPGSVDSLLLSSMIQTLKVPFDDSIAYTQLVFTVTFFAGIFQVAFGLFRFGFLVEYISQSTIVGFLAAAAVGIGLQQLKGLFGIVNFTNKTALISVVKSLWTSFRNQSAWHPYNFVIGFSFLCFILFTRFLGKRNKKLIWLSHIAPLLSIILSSVIAYKINVHEHQVKDYRVEVLGPIKGGRSLSRTAVSFNAGSETMASNIVMALTVLLSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKACEIWKVDKMDFLACAGAFLGVLFASAEIGLAIGITISFAKIILTSIQPAIAVIGRLPGTDSFGDVQQYPMALNIPGVFIVSLKSAWLCFANANLVEERIERWVTNEKAKHGKGGESTFHHVIIDASSLTNIDTTGIASLVELNKNMTSRGVKLAIANPRWHVIHKLRLANFVSKIGGRVFLSVGEAVDACVGTKIVACSQSVFTRQSSPKHFNMASSAMETCKSEDLHMQVDIEKNAQDVRSQWVLNAPEPPSPWRVVVDSVRKTISHYKQKFSSLTDQPCTTLLLSVLQVVFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLVYAVMGTSREIAIGPVAVVSLLLSSMMEKLVDPASDPVGYTKLILLATLLAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLLGISHFTTKTDIVSVIKAVWEAVHNPWNPRNFILGCSFLVFILTTRFLGKKKKKLFWLASISPLVSVILSTLFVFITRADKNGVKIVKHVKGGLNPISIHQLDFNSPHIGEVAKIALVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAITVLVSLQFLTKLLYYTPIAILSSVILSALPGLIDLSEAYKIWKVDKIDFLACAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTNLFCDVYQYPMAVQIPGVVIIRVKSALLCFANANFVRERYLSNIVSTYLVNIDTSGIAALEELHKSLSSHGKQLAIANPRWQVIHKLKVSNFVAKFGGKVFLTVEEAVGCKGRC* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00174 1239 FunFam Sulfate transporter 31 441 587 - -
Lapu6g00174 1239 SUPERFAMILY SpoIIaa-like 468 584 IPR036513 -
Lapu6g00174 1239 CDD STAS_SulP_like_sulfate_transporter 1134 1227 - -
Lapu6g00174 1239 ProSiteProfiles STAS domain profile. 481 584 IPR002645 -
Lapu6g00174 1239 NCBIfam sulfate permease 688 1229 IPR001902 GO:0016020|GO:0055085
Lapu6g00174 1239 ProSiteProfiles STAS domain profile. 1177 1236 IPR002645 -
Lapu6g00174 1239 Pfam STAS domain 462 580 IPR002645 -
Lapu6g00174 1239 Pfam STAS domain 1134 1232 IPR002645 -
Lapu6g00174 1239 SUPERFAMILY SpoIIaa-like 1137 1233 IPR036513 -
Lapu6g00174 1239 CDD STAS_SulP_like_sulfate_transporter 462 575 - -
Lapu6g00174 1239 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Lapu6g00174 1239 Gene3D STAS domain 1113 1237 IPR036513 -
Lapu6g00174 1239 Gene3D STAS domain 441 586 IPR036513 -
Lapu6g00174 1239 Pfam Sulfate permease family 332 409 IPR011547 GO:0016020
Lapu6g00174 1239 Pfam Sulfate permease family 701 1081 IPR011547 GO:0016020
Lapu6g00174 1239 Pfam Sulfate permease family 96 329 IPR011547 GO:0016020
Lapu6g00174 1239 ProSitePatterns SLC26A transporters signature. 730 751 IPR018045 GO:0008271|GO:0008272
Lapu6g00174 1239 PANTHER SULFATE TRANSPORTER 670 1234 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00174 Lapu-Chr6 1442624 1464051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00174 303 589 Inorganic Solute Cotransporters AT5G10180 52.901 8.54e-89 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00174 K17469 - gmx:100817831 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00174 6 1442624 1464051 Lapu6g00174 6 1442624 1464051 ECH