Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu6g00174 | ATGTGCAGGAACTCTAGTAATTCAGAGATGGTAGCTTCAAACAAAAGCACGTTAGAAGAGGTTTTGGACATTGAAAACAACATGGCTCAGTGGGTGCTGAATCCTCCAGATCCACCCTCCATGCTGCGTCAGGTCGTGGACAACGTCAAGGACATTCTTTTACCGCATCCACAACCAAACACATTCTCTTCTCTCAAGAACCAACCCTTTTCCAAACGCGCTTTTGCCTTCTTGCAGAACTTGTTTCCCATTCTTGCTTCATTCCAAAACTACAATGCCCAAAAGTTCAAGTGCGATTTCATGGCCGGCCTAACCCTTGCAATCTTCGCCATTCCTCAGTGTATGGGAAATGCAACATTGGCTCAGCTAAGTCCAGAATATGGCCTCTACACAGGAATTGTGCCCCCTATTATTTATGCTCTGCTAGCGAGTTCAAGGGAGATAGTGATTGGACCTGGATCTGTAGATTCACTGCTACTTTCCTCAATGATTCAGACATTGAAAGTTCCATTTGATGATTCTATTGCATACACTCAGCTTGTTTTCACTGTAACTTTTTTTGCGGGCATCTTTCAAGTTGCTTTCGGCCTCTTTAGGTTCGGTTTTCTGGTGGAATATATTTCCCAATCCACGATCGTAGGGTTCTTGGCAGCAGCTGCCGTGGGCATTGGACTACAACAATTGAAGGGATTATTTGGGATCGTTAATTTTACCAACAAAACTGCTTTAATTTCCGTGGTCAAATCGCTTTGGACATCCTTCAGAAACCAATCAGCGTGGCATCCCTACAACTTCGTTATTGGATTCTCATTTCTATGCTTCATCCTTTTTACCAGATTCCTGGGGAAAAGGAACAAGAAACTTATCTGGTTGTCACACATTGCTCCTCTCCTTTCTATCATTCTATCCTCTGTGATTGCTTACAAAATAAATGTTCACGAGCATCAAGTGAAGGACTACAGAGTTGAAGTGTTGGGACCAATTAAAGGAGGTAGGTCTTTGTCACGTACTGCTGTAAGCTTCAATGCTGGGTCAGAAACAATGGCATCGAACATAGTGATGGCACTGACGGTGCTCTTGTCACTTAAATTTTTGACAGGGCTTTTATATTTCACTCCGAAAGCAATCTTAGCAGCGATAATTCTTTCGGCTGTACCAGGACTGATTGACCTAAACAAAGCATGTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGTGCTGGAGCTTTCTTGGGAGTCTTGTTTGCTTCTGCGGAAATAGGGCTTGCAATTGGGATCACGATATCATTCGCGAAGATAATTCTAACCTCAATTCAACCAGCCATAGCGGTTATTGGAAGGCTTCCAGGAACCGATTCATTCGGCGATGTTCAACAGTATCCAATGGCACTCAACATTCCTGGAGTTTTCATCGTCTCTTTAAAATCTGCATGGCTTTGTTTTGCAAATGCAAATCTTGTGGAGGAAAGGATTGAGAGATGGGTGACCAATGAAAAAGCTAAGCATGGGAAAGGAGGAGAAAGCACCTTCCATCACGTCATCATTGATGCCTCAAGTCTTACGAATATTGACACCACCGGAATTGCTTCTCTGGTGGAGCTCAATAAAAATATGACTTCACGTGGAGTAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTTAGATTAGCTAACTTCGTGAGCAAAATTGGAGGAAGGGTTTTCCTTTCTGTGGGGGAAGCAGTGGATGCTTGTGTTGGCACTAAAATAGTTGCTTGTAGTCAATCAGTTTTCACGAGACAAAGTTCTCCCAAACACTTCAACATGGCTTCTTCAGCGATGGAAACCTGCAAATCAGAGGATTTACACATGCAGGTGGACATTGAGAAGAACGCACAGGATGTAAGGTCTCAGTGGGTTCTTAACGCTCCTGAGCCCCCAAGTCCATGGCGTGTGGTTGTAGATTCTGTTAGGAAAACCATCTCCCACTATAAACAAAAGTTTTCCTCTCTCACAGATCAACCCTGCACCACACTCCTCCTGTCAGTTCTGCAGGTTGTTTTTCCTATTCTTGCTTGGGGCAGAAACTACACTGCAACTAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATAGCTAGTCTCTGTATTCCCCAGAGCATTGGATATGCAACCTTGGCACATCTTGATCCTCAATATGGCCTTTACACAAGTGTGGTACCACCACTTGTATATGCTGTGATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTGGCAGTAGTTTCTTTGCTGTTATCCTCCATGATGGAGAAATTAGTAGACCCTGCTTCTGATCCAGTGGGTTATACAAAGCTAATTCTACTAGCTACTCTCTTGGCTGGCATCTTTCAGACTTCCTTCGGACTCTTCAGGCTGGGGTTCCTTGTGGATTTCCTATCGCATGCTGCAATAGTTGGATTTGTGGCAGGAGCAGCCATTGTGATTGGGCTTCAACAGTTGAAGGGACTCTTAGGAATCAGCCATTTTACGACCAAAACCGACATAGTCTCTGTCATCAAAGCTGTCTGGGAAGCAGTTCATAATCCCTGGAATCCTCGAAATTTTATCCTTGGATGCTCGTTCTTGGTCTTCATCCTAACAACGAGATTTCTGGGTAAAAAGAAGAAGAAACTGTTCTGGTTGGCATCAATTTCTCCTCTTGTATCTGTTATTTTGTCGACTCTATTTGTGTTTATTACAAGAGCTGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGAGGATTAAATCCCATCTCCATCCATCAGTTAGACTTCAACAGTCCCCACATAGGAGAAGTCGCCAAAATTGCACTAGTGGTTGCTGTCGTTGCCCTTACAGAATCTATAGCTGTTGGACGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGTTTGACAAACATCATAGGATCTTTCACCTCTTGCTACGTTGCAACTGGTTCGTTCTCCCGCACTGCTGTTAATTATGCAGCTGGGTGTGAAACTCTGGTGTCAAACATTGTGATGGCCATCACGGTCTTGGTATCACTGCAGTTTTTGACAAAGCTCTTGTATTACACTCCTATAGCTATTCTTTCTTCTGTGATACTATCCGCTCTCCCAGGACTTATTGACCTCAGTGAAGCTTACAAAATCTGGAAGGTTGATAAGATAGACTTTCTTGCTTGTGCTGGTGCCTTCTTCGGAGTTTTGTTTGCTTCCGTGGAGATTGGTCTGCTAGTCGCGGTGGTTATATCTTTCTCAAAGATCATTCTCATCTCAATTCGACCAGGCACAGAAACTCTAGGAAAACTTCCGGGAACTAATTTGTTCTGCGATGTCTATCAGTATCCCATGGCAGTCCAGATTCCTGGGGTTGTGATAATACGAGTCAAGTCTGCGTTGCTCTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGTATTTGTCAAATATAGTAAGTACTTATTTGGTGAACATTGACACCTCTGGCATTGCTGCTCTAGAGGAACTGCATAAGAGTTTGTCTTCACATGGAAAACAGTTAGCCATTGCGAACCCCAGGTGGCAAGTGATACACAAGCTAAAGGTGTCCAACTTTGTTGCCAAATTCGGTGGCAAAGTATTTCTGACTGTTGAAGAAGCTGTTGGCTGCAAGGGCCGGTGCTAA | 3720 | 0.4336 | MCRNSSNSEMVASNKSTLEEVLDIENNMAQWVLNPPDPPSMLRQVVDNVKDILLPHPQPNTFSSLKNQPFSKRAFAFLQNLFPILASFQNYNAQKFKCDFMAGLTLAIFAIPQCMGNATLAQLSPEYGLYTGIVPPIIYALLASSREIVIGPGSVDSLLLSSMIQTLKVPFDDSIAYTQLVFTVTFFAGIFQVAFGLFRFGFLVEYISQSTIVGFLAAAAVGIGLQQLKGLFGIVNFTNKTALISVVKSLWTSFRNQSAWHPYNFVIGFSFLCFILFTRFLGKRNKKLIWLSHIAPLLSIILSSVIAYKINVHEHQVKDYRVEVLGPIKGGRSLSRTAVSFNAGSETMASNIVMALTVLLSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKACEIWKVDKMDFLACAGAFLGVLFASAEIGLAIGITISFAKIILTSIQPAIAVIGRLPGTDSFGDVQQYPMALNIPGVFIVSLKSAWLCFANANLVEERIERWVTNEKAKHGKGGESTFHHVIIDASSLTNIDTTGIASLVELNKNMTSRGVKLAIANPRWHVIHKLRLANFVSKIGGRVFLSVGEAVDACVGTKIVACSQSVFTRQSSPKHFNMASSAMETCKSEDLHMQVDIEKNAQDVRSQWVLNAPEPPSPWRVVVDSVRKTISHYKQKFSSLTDQPCTTLLLSVLQVVFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLVYAVMGTSREIAIGPVAVVSLLLSSMMEKLVDPASDPVGYTKLILLATLLAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLLGISHFTTKTDIVSVIKAVWEAVHNPWNPRNFILGCSFLVFILTTRFLGKKKKKLFWLASISPLVSVILSTLFVFITRADKNGVKIVKHVKGGLNPISIHQLDFNSPHIGEVAKIALVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAITVLVSLQFLTKLLYYTPIAILSSVILSALPGLIDLSEAYKIWKVDKIDFLACAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTNLFCDVYQYPMAVQIPGVVIIRVKSALLCFANANFVRERYLSNIVSTYLVNIDTSGIAALEELHKSLSSHGKQLAIANPRWQVIHKLKVSNFVAKFGGKVFLTVEEAVGCKGRC* | 1240 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu6g00174 | 1239 | FunFam | Sulfate transporter 31 | 441 | 587 | - | - | |
| Lapu6g00174 | 1239 | SUPERFAMILY | SpoIIaa-like | 468 | 584 | IPR036513 | - | |
| Lapu6g00174 | 1239 | CDD | STAS_SulP_like_sulfate_transporter | 1134 | 1227 | - | - | |
| Lapu6g00174 | 1239 | ProSiteProfiles | STAS domain profile. | 481 | 584 | IPR002645 | - | |
| Lapu6g00174 | 1239 | NCBIfam | sulfate permease | 688 | 1229 | IPR001902 | GO:0016020|GO:0055085 | |
| Lapu6g00174 | 1239 | ProSiteProfiles | STAS domain profile. | 1177 | 1236 | IPR002645 | - | |
| Lapu6g00174 | 1239 | Pfam | STAS domain | 462 | 580 | IPR002645 | - | |
| Lapu6g00174 | 1239 | Pfam | STAS domain | 1134 | 1232 | IPR002645 | - | |
| Lapu6g00174 | 1239 | SUPERFAMILY | SpoIIaa-like | 1137 | 1233 | IPR036513 | - | |
| Lapu6g00174 | 1239 | CDD | STAS_SulP_like_sulfate_transporter | 462 | 575 | - | - |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu6g00174 | K17469 | - | gmx:100817831 | 1114.75 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lapu6g00174 | 6 | 1442624 | 1464051 | Lapu6g00174 | 6 | 1442624 | 1464051 | ECH |
Showing 1 to 1 of 1 entries