Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00131 ATGTTAGGGGAAGAGGGGAAGGACAAAGCCGCCGGTGGTAGCGGTGTTGCATGGAAAATCTATTCTCGTTCGGTTTCATGGACTGATAGGTCTCCTCACAGCCGAAAGCCACCAACAAATAGCAAACCAAGACCACTATTGCCACCCCTTCAGCCTCTTTCAATCAACAAGCGCAACGTGGAGGAATGGCCTAGTGCTGGATCTGATGATCTTGGAGTTTGGCCACTTCCTCAGACTCCAAGAGGCTCCATCAGAGCCTATGATTCAAGTCAACCCACCAAGGATTTTCTGTTCAAGAGGGACAAATTGGCCTTCTTTGACAAGGAGTGTTCCAGAATTGCTGAGCACATATACTTGGGGAGTGACACAGTGGCCAAGAACCATGAACTCCTCAGGAAGAATGGAATCACTCATGTGCTCAACTGTGTTGGGTTTGTTTGTCCTGAGTATTTCAAAGGTGATTTTGTGTACAAGACACTTTGGTTGCAGGATAGCCCCACCGAGGACATCACAAGTATTCTCTATGATGTGTTTGATTACTTCGAGGACGTCCGAGAGCAAGGCGGGCGTGTCCTTGTCCATTGCTGTCAGGGCGTTTCTCGATCAACGACCTTGGTGATTGCTTATATCATGTGGAGGGAGGGACAGAGCTTTGAAGATGCTTTTCAGTTTGTGAAGACTGCAAGGGCTGTGACCAATCCAAACATGGGTTTTGCCTGTCAACTTTTGCAGTGCCAGAAACGGGTCCATGCTATGCCTGCAAGTCCAAATTCTATTCTCAGGATGTACCGGATGGCTCCTCACTCCCCCTATGACCCTCTTCATCTGGTTCCCAAGACGGTAAGCCAGCCAGGTGCACGAGCACTTGATTCTCGTGGGGCCTTCATTATTCATATTCCTTCTGCTATCTATGTTTGGAATGGGAAACATTGTAACTCAGTGATGTCATGCAATGCAAGGAGTGCAGCCTTTCAGGTTATCCGTTATGAGAAGGCAAAGGGTCCAATTCTGAGCATCCATGAAGATGAAGAACCACCTGGGTTTTGGATTGCTCTTTCTGATGAGCAACGCTCATCAGGTGATTCTGACAAAGGAGGGGTCATGGAGGAAGAACCAGTGTTGCCCTCTGAAGGGATGGAGAGTGCAGGGCCCAATTATTTGGGGAATGGTCCGAGAAAAGTTTATGCATATGATTTGGATTTTGAGATTTTCCACAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTTTCCTTGTCTGATCCAGGATCGGAAACTTGTCTTCCTGCTAGAGAACACGGTTGGGCAAGACTGAGGCGGAAGTTTGCTAGTGGACTACTCACATCCCCCAGATTGAACAGTGAAGCTGATTCAACCCCATGCAATGATCAATCCAGTGCAATTGTGGAAGCTGAAAAACAATATGCTGCACATGAGCCTTTGTCACTATCATCTAGAGAAACGTGTGGCTCACCAGATTCATTTGAATGCTATCCAAATAACAGCTTAGGTAGGGAAAAAGGTGATCATGAAGCCATGGATTTCTCTGTTCATGGTGTTTCTTCATCATTGCCTCTGTCTCCTCCTGGCACATCAAATCCTTTTCCTTGTTTTATAAGCTGCAGCCCAAAATTCAACTCTAAATCTCCAACACTTTCACCTTCAAGTTCTGATTACGCCAGCTCATTTACTTTTTCACCTTCTTCTACCAATTGGTCAGACTTGTCTTTTGTGTCTTCTCGGCAGCCATCACCATCTGGCCTTGAATCAGCTGAACCCCTTTATGTTAAAGATGCATCTTTCTCGGAAGGTTCCTCTTTACTTCATAAAGAAGCTGTCTCTTCGCCCTCGGAGGCATTTTCAGCTCATTACACATTAGAAGGGGCAAACTCTAATTTGTCCTTGAAAGGTTCTTCCCTTTCCATTGCAGAGCGCAGGGGGAGTCATCCACCACCTCTGATGTTGATATCCTCAGCCAGTGAATCCTCTCACATCCCCAAGAACCTGGATGATATTTGCAAACAATCTGACCATGAAAACAAGGGAACATGGCTAATTTCAGATGACTACGTCATTAGTTCAGGTGTTGAACCCGAGAGTGAAAATTATTATAAAGAGGATCGTGGTACAGAGTTATGTAAAATGATGGCTGAGCTTGAGATACAGGAGAAAGAAAATGGGATGTGA 2184 0.4597 MLGEEGKDKAAGGSGVAWKIYSRSVSWTDRSPHSRKPPTNSKPRPLLPPLQPLSINKRNVEEWPSAGSDDLGVWPLPQTPRGSIRAYDSSQPTKDFLFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRKNGITHVLNCVGFVCPEYFKGDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTTLVIAYIMWREGQSFEDAFQFVKTARAVTNPNMGFACQLLQCQKRVHAMPASPNSILRMYRMAPHSPYDPLHLVPKTVSQPGARALDSRGAFIIHIPSAIYVWNGKHCNSVMSCNARSAAFQVIRYEKAKGPILSIHEDEEPPGFWIALSDEQRSSGDSDKGGVMEEEPVLPSEGMESAGPNYLGNGPRKVYAYDLDFEIFHKALAGGVVPPFSLSDPGSETCLPAREHGWARLRRKFASGLLTSPRLNSEADSTPCNDQSSAIVEAEKQYAAHEPLSLSSRETCGSPDSFECYPNNSLGREKGDHEAMDFSVHGVSSSLPLSPPGTSNPFPCFISCSPKFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFVSSRQPSPSGLESAEPLYVKDASFSEGSSLLHKEAVSSPSEAFSAHYTLEGANSNLSLKGSSLSIAERRGSHPPPLMLISSASESSHIPKNLDDICKQSDHENKGTWLISDDYVISSGVEPESENYYKEDRGTELCKMMAELEIQEKENGM* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00131 727 ProSitePatterns Tyrosine specific protein phosphatases active site. 193 203 IPR016130 GO:0016311|GO:0016791
Lapu6g00131 727 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 251 IPR020422 GO:0006470|GO:0008138
Lapu6g00131 727 MobiDBLite consensus disorder prediction 26 52 - -
Lapu6g00131 727 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 168 229 IPR000387 GO:0016311|GO:0016791
Lapu6g00131 727 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 102 251 IPR029021 -
Lapu6g00131 727 Gene3D Protein tyrosine phosphatase superfamily 89 251 IPR029021 -
Lapu6g00131 727 SMART dsp_5 109 248 IPR020422 GO:0006470|GO:0008138
Lapu6g00131 727 Pfam Dual specificity phosphatase, catalytic domain 117 247 IPR000340 GO:0008138|GO:0016311
Lapu6g00131 727 PANTHER MKPA PROTEIN 27 682 - -
Lapu6g00131 727 SUPERFAMILY Actin depolymerizing proteins 255 355 - -
Lapu6g00131 727 MobiDBLite consensus disorder prediction 355 382 - -
Lapu6g00131 727 CDD DSP 110 244 - -
Lapu6g00131 727 Gene3D Severin 261 359 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00131 Lapu-Chr6 1010211 1013523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00131 28 145 Protein tyrosine phosphatase (PTP) family AT3G55270 51.562 1.58e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00131 - - gmx:100775448 1078.93