Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00118 ATGGCAGCTCTGTTACCTTGCGCGCCCAACATAGTCTCTGCTCCGTTCGGGAACCGGAGCACGACCCGCCTTCCCAACCGTCCTCACTCCCACGCTTTCTCCGGTTCCTCCAGACACTTTCTTCGCGGTTCGCTCTCCGTCGCTCGGTTCGGATTTAAACCTTCTTTCTTGCCCGAGCCGGAGGACGCCGAAGGCTTGCTCAGAGAACTGCTTGGCCGAGCGGAGGGACTTCTTTATACGATTGCCGACGCCGCCGTTTCTTCTTCTGACACGGTTACTACGGCTTCCGCCACCGCCAAACAGAGCAACGATTGGCTTTCTGGAATCACCAATTACATGGAGACGGTTCTCAAGGTTCTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCTCTAACCAAAAAACAGGTAGAATCCGCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGTGATCAGGAGAGAATTCAACTCGAAACTGCTCGATTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCCACACTCGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTGGCAGACGAGGGACTTCTCACTGAAGGCTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAAATGGCAGCGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCTCCCCCCCCTTGGATGGTCAGATACATTGGCTTACCTGGTCTTGCCGGTGTTACTGGTCGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTCTTGACCAAGTTCCTTCCATTGATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATGAAGAATGACCTAACCCAGGTTCCGAAGTCAATATCTAAACTAAAGTCCACAATAGTGGAAGAAGCAAGACAAAGTGAGAAAACACCAGAGGGGCCACGACCTGGCGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAGAAAACAGGAAAGGCATGGAAACAGCAGTTAGAGGAACTAAAGTAGATGAGACTCACGAGACACTTGAGAAAACTGGAGGTGATTCAATTGTTGAAAAATCTCTATCTGTGGGTTCAGATACTGATCCCTCCATATCTGGAGTAGTAAATGGTAACCTATTAAATAAAGACTTGGAGGGAAATCAGAATTCTTCATCTACATCTGAGACAGAAAGTAATGAAGGCTCTGCTCATTTCATCAATGATGTGATAAACGAGAAAAATTCAGACAAGGAACAAAGAGAAGTATTAACATCTACTACCACCACAAACAGACAACCTCCTGCAGAAGACGCAGATCGCATGATAAGGGATTGA 1611 0.4593 MAALLPCAPNIVSAPFGNRSTTRLPNRPHSHAFSGSSRHFLRGSLSVARFGFKPSFLPEPEDAEGLLRELLGRAEGLLYTIADAAVSSSDTVTTASATAKQSNDWLSGITNYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQIKAIQERYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGLPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKNDLTQVPKSISKLKSTIVEEARQSEKTPEGPRPGDRFKQLKEQEARRRQQREEEENRKGMETAVRGTKVDETHETLEKTGGDSIVEKSLSVGSDTDPSISGVVNGNLLNKDLEGNQNSSSTSETESNEGSAHFINDVINEKNSDKEQREVLTSTTTTNRQPPAEDADRMIRD* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00118 536 MobiDBLite consensus disorder prediction 383 536 - -
Lapu6g00118 536 MobiDBLite consensus disorder prediction 383 445 - -
Lapu6g00118 536 Coils Coil 401 421 - -
Lapu6g00118 536 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Lapu6g00118 536 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Lapu6g00118 536 PANTHER OXA1 82 412 IPR001708 GO:0016020|GO:0032977
Lapu6g00118 536 MobiDBLite consensus disorder prediction 450 501 - -
Lapu6g00118 536 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00118 Lapu-Chr6 911193 929238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00118 70 415 Chloroplast and Mitochondria Gene Families AT2G28800 57.349 3.93e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00118 K03217 - gmx:100802546 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00118 6 911193 929238 Lapu6g00118 6 911193 929238 ECH