Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00099 ATGGAAGAGGAAATCAAAACCGAATTCAAAAGAAGCGGTTTCGACATCGAAGATGAACAAGAAATTCTCAGCAAATGTGTCACTTTCTGCATCAACTACAGTCTCACTCCTTCCGATCTCGTCTCAAGCTGGGAAGCTCATTACCTCAATAGGTTTCTGAATGGACCAATGGTAGAGAGTGCAGAAATTGATGGCTTTCTGTTGCATCTACAAAATCAGAAGAAAGAGGACGTTATAAAGGAAAAGGAGGAAGCTGGCTTGCATATGTACTCTATCGGAGATGTAGAAATGCTCTTAAATAATGATGATGATACAAAGGACAATACTCCTGGAACTCCAATAAATCACCATCATGATCTTTTTTCTCCTTCAACTGACACATCTCTAATGTATGAGAATGTTTTATCTTCTGGGAAAGCATCAAAATCAAAACTAATAACACCCTTTTCAAAGCGAACGGATAGGTTTGCAGTGAAATTTAGTGTCAACACTCTCCCTAGTGTAGAGAATGGGAAGCAAGAACCTAACCATGAGGATACTGAGAATGATGAAGACGATGTTGTCAGAAGAGTTCCACAACGTCAAAGGTGTTCATTGATTATTCATGGATCAGGACTCAAACCAGGTTGTAGATTCATGTATGATAGAACAGAGGATAGGCTTAATGCTATAGAAAACCGAATTAGAAAACATACAAGGGCATTTGTAGCTTCTGGGATCTATGAAGAACCCACAGACCCTACAACTGCTTCACAGAGGAGCATTTTCGCTGTTGGCATGATTTGTTGTGATGCAGAAGGCCGTTTAAATGACAAGTCCGTTATGCTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGTGTTCGCCTTGACTTGCAACGTTTAAACCATTATTCAATTTTCCCTGGCCAGGTAGTTGGTATTGGAGGACATAATCCTAGTGGGCATTGCTTCGTTGCATCTAAATTGGTGGATTCTATACCTATGTCTGTTGCTGATGAGAATTTGAATCCGCTAAAGAAGCAAGCTATTGATAAGGAGAATCAGTCTACTGATACGCTTTGTAAACAGAGAGAGTTATCAATGATTATTGCAGCTGGCCCCTTTACTACAGCAGATAATTTGTTGTTTGAGCCTCTTACAGAACTGCTGCAATATACAAAACGAAGACCGCCACAGTTGCTTGTATTGCTGGGACCATTTGTGGACTCTGAACACCCAGAACTTAAGAAAGGAACTGTAGACAGAAGTTTTGATGAAATATTTCATTTTGAAATCCTGAGCAAGTTGGAAGATTATGTAGAACGTGTGGGTTCTGGAACACGTGTTCTTCTTGTTCCATCTATACGGGATGCTAACCATGATTTTGTGTTTCCTCAGCCTGCATTGGAAATCAATTTATCGGATTTCAAATCTCAGATAGTCAGTCTCGCTAATCCTGGAATCTTTGAGGCCAATGAGGTTAAGGTTGCTTGCTGCACCGTGGATATTCTCAAGCAAATCAGTGGAGAGGAGATATCGCGAACTGCAACGGATGGAAAACCCATCGATCGCATGAGTAGACTTGCAAACCATATTCTCAACCAACAAAGCTTCTATCCACTCTACCCACCCGCAGAAAGTGTTCCCTTGGACTTTTCGCTTGCTCCAGAAGCCCTTCAACTTTCATTGGTTCCGGACATACTTATCCTGCCTTCAGACATCAAGTACTTTGTCAAGGTGCTTAGCAGTGAAAGTGAAGGGATAAACAACACGAAATGCATAGCTGTCAATCCGGGTAGACTAGCCAAGGGAGAAGGAGGTGGAACTTTTGTCGAGCTTGATTATGGTGGGGCTTCCAACCAAATTAACGCTTCAATTGTTGGCATATGA 1872 0.4156 MEEEIKTEFKRSGFDIEDEQEILSKCVTFCINYSLTPSDLVSSWEAHYLNRFLNGPMVESAEIDGFLLHLQNQKKEDVIKEKEEAGLHMYSIGDVEMLLNNDDDTKDNTPGTPINHHHDLFSPSTDTSLMYENVLSSGKASKSKLITPFSKRTDRFAVKFSVNTLPSVENGKQEPNHEDTENDEDDVVRRVPQRQRCSLIIHGSGLKPGCRFMYDRTEDRLNAIENRIRKHTRAFVASGIYEEPTDPTTASQRSIFAVGMICCDAEGRLNDKSVMLQSSIEHSGGECVRLDLQRLNHYSIFPGQVVGIGGHNPSGHCFVASKLVDSIPMSVADENLNPLKKQAIDKENQSTDTLCKQRELSMIIAAGPFTTADNLLFEPLTELLQYTKRRPPQLLVLLGPFVDSEHPELKKGTVDRSFDEIFHFEILSKLEDYVERVGSGTRVLLVPSIRDANHDFVFPQPALEINLSDFKSQIVSLANPGIFEANEVKVACCTVDILKQISGEEISRTATDGKPIDRMSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDILILPSDIKYFVKVLSSESEGINNTKCIAVNPGRLAKGEGGGTFVELDYGGASNQINASIVGI* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00099 623 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 611 IPR016722 -
Lapu6g00099 623 Gene3D - 341 509 - -
Lapu6g00099 623 Gene3D - 513 619 - -
Lapu6g00099 623 FunFam DNA polymerase alpha subunit B 1 76 - -
Lapu6g00099 623 MobiDBLite consensus disorder prediction 172 186 - -
Lapu6g00099 623 Coils Coil 214 234 - -
Lapu6g00099 623 Gene3D - 1 75 IPR043034 -
Lapu6g00099 623 MobiDBLite consensus disorder prediction 167 186 - -
Lapu6g00099 623 FunFam DNA polymerase alpha subunit B 343 508 - -
Lapu6g00099 623 PIRSF DNA_pol_alpha_2 1 614 IPR016722 -
Lapu6g00099 623 Pfam DNA polymerase alpha/epsilon subunit B 363 573 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00099 2 623 Core DNA Replication Machinery Family AT1G67630 59.265 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00099 K02321 - gmx:100795306 1028.08