Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00077 ATCATGATTCCAACACTTGAAACTATGTTCCAAAGCACCTTCTTCTCTTCTTCTTGCTCTTGGTCTCTCATCACTCTCTTTCTCTCCACGTCACTCGCTGCTTTTGCTATCTCCTTCAACTACTGGCTTGTCCCGGGAGGGTTCGCATGGAGAAAACATCAGAACCATTACAAAGGCCACCCAAAACTCTCTGCTCCAGTGGGCTGGCCCATATTAGGGACCTTGCCTGAAATGGGCTCTCTGGCCCATAGAAAACTTGCTTCCATGGCCACCTCACTAAACGCAAAAAGGCTCATGGCACTTAGTTTGGGAACCAACCGGGTTGTTATTAGCAGCCACCCAGAGACCGCAAGAGAGATTCTTTGTGGGTCAGGCTTCTCGGACCGGCCCGTTAAAGAATCGGCCCGAACGCTCATGTTTGAGCGTGCCATTGGATTTGCTCCATATGGAACATATTGGCGTCACCTTCGTAAGGTGGCGACCACGCACATGTTCTCTCCCAGGAGGATTTCTGATTTGGAGAGCCTCCGACAAAGAGTGGCGGCTGAAATGGTGATGAAAACGCGGAAAGAGATGGAGATGAAAGGGGCGGTGGAGGTTCGAGGGATATTACATGAAGCGTCCCTCAGGACCATGTTGGAGAGTGTTTTTGGTATCAATAATTGTATAGAATCGGAAACAGAGAAAGTGTTGGGAGATATGATCAAGGAAGGGTATGAGTTGATTTCCGTGTTTAACTGGGAAGACTATTTTCCCTTCAGGTTTTTGGACTTTCATGGGGTAAAGAGAAGGTGTCACATATTGACGAGTAAGGTTAAGAGTGTGGTGGGTCAAATGGTGGAGGAAAGAAAAGAACGTGGCGAGGTGGTTGGACAGAGTGATTTTCTTAGCGCTTTGTTGTCGTTGCCCGAAGAGGAAAGGATAGGTGAATCAGATACAGTGGCTATCTTATGGGAAATGTTGTTTCGGGGAACAGACACAGTTGCTATACTTTTGGAGTGGATTATGGCCATGATGGTGGTACACCAAGATGTGCAGATGAAAGCGCGCCAAGAGATTGACACATGCATTGGCCAAAATAATGACGTGAGAGACTCAGACATTCCAAATCTCCCTTACCTTCAAGCCATAGTGAAGGAGGTGCTTCGATTGCACCCACCAGGCCCCTTGCTTTCATGGGCACGTCTGGCAATCCATGATGTTCATATTGACAAACTCCTTGTCCCTGCTGGCACAACTGCAATGGTTAACATGTGGGCCATATCACACGACTCCTCTATTTGGAAGGATCCCTGGAGCTTTAAGCCTGAACGATTCATGAATGAAGAAGTGTCAATTATGGGGTCAGACATGCGACTTGCACCATTCGGTGCAGGACGTAGGGTCTGCCCTGGAAAAACATTGGGTTTAGCCACTGTTCATCTATGGCTCGCACAATTTCTTCACCGTTTCATATTGGTCCCAGCTCATCCCGTGGATCTTTCAGAATGCCTTAAGCTCTCTCTCGAAATGAAAAAACCTTTACAGTGCAAAGTGATCCCTAGGGACAACACCATTACCTCT 1563 0.4754 IMIPTLETMFQSTFFSSSCSWSLITLFLSTSLAAFAISFNYWLVPGGFAWRKHQNHYKGHPKLSAPVGWPILGTLPEMGSLAHRKLASMATSLNAKRLMALSLGTNRVVISSHPETAREILCGSGFSDRPVKESARTLMFERAIGFAPYGTYWRHLRKVATTHMFSPRRISDLESLRQRVAAEMVMKTRKEMEMKGAVEVRGILHEASLRTMLESVFGINNCIESETEKVLGDMIKEGYELISVFNWEDYFPFRFLDFHGVKRRCHILTSKVKSVVGQMVEERKERGEVVGQSDFLSALLSLPEEERIGESDTVAILWEMLFRGTDTVAILLEWIMAMMVVHQDVQMKARQEIDTCIGQNNDVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHIDKLLVPAGTTAMVNMWAISHDSSIWKDPWSFKPERFMNEEVSIMGSDMRLAPFGAGRRVCPGKTLGLATVHLWLAQFLHRFILVPAHPVDLSECLKLSLEMKKPLQCKVIPRDNTITS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00077 521 Gene3D Cytochrome P450 49 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 FunFam Cytochrome P450 78A5 55 515 - -
Lapu6g00077 521 PANTHER CYTOCHROME P450 78A7-RELATED 17 515 - -
Lapu6g00077 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Lapu6g00077 521 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 Pfam Cytochrome P450 66 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g00077 521 SUPERFAMILY Cytochrome P450 66 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00077 Lapu-Chr6 616959 618614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00077 13 515 Cytochrome P450 AT1G74110 49.716 1.72e-180 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00077 - - ccaj:109797962 846.654